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Information for unigene UN19578
| FASTA Sequence |
| Unigene ID: UN19578 | Length: 1150 |
SSR | | TTTTTCAAAGTCTGCTCCTTTTTTTTTTGGTTGTCATTTTGGGGAGAGAGAGAGAGAAATGCAGAGACTGAGATCTCAGCTACTGG
CTAGGCCTCTCTTGGAGGAGAGCAGCAGGCTGCGAGGGTATTGCACGAGCTCTTCCTCAACCGAAAAGATCGTAGCTTCGGTGCTT
TTCGAGAGACTGCGAGTTGTGATACCAAAACCGGATCCTAACGTTTACGCTTTTCAGGAGTTCAAATTCAATTGGCAGCAGCAGTT
TCGCCGTAGATACCCTGATGAGTTCTTGGACATTGCTAAAAACAGAGCCAAGGGTGAATATCAAATGGATTATGTCCCTGCTCCCA
GAGTTACAGAGGCTGACAAGAATAACGATAGGAAGTCATTATATAGAGCTCTGGACAAGAAGTTGTATCTTCTTGTCTTCGGCAAG
CCATTTGGAGCTACTAGTGACAAACCTGTCTGGCATTTCCCTGAAAAAGTCTACGATTCTGAGCCTACTCTTCGCAAGTGTGCTGA
ATCTGCTTTGAAGTCAGTCTTGGGAGACCTCACTCACACCTACTTTGTTGGAAATGCTCCAATGGCTCACATGGCTGTACAACCTA
CTGAAGAAACACCTGATTTGCCATCTTTCAAGAGATTCTTCTTCAAATGCAGTGTAGTAGCAGCATCGAAGTACAACATAAGTAAC
TGCGAAGACTTTGTGTGGGTAACCAAAGATGAGCTTTTGGAGTTCTTCCCTGACCAAGCTGAGTTCTTCAACAAGATGATCATTAG
CTGAGAGACTAGTCAACCCACACCAACAAAAACTCCTCTCTCTTTTTTTTTCCTTGTGGTTCTCTTTTAGTATGATAGAAAACAAT
AATACATGAACTTTACCAAAACAAACCATGTTTTTGGTCAAGACATACACATGGATATAATGTGTGTCATGGTCACTGTGATAACC
ATACCAAACCATGTTTTTGGTTGTTTTAGTCGCGCACACGTGTGGGGGTTACGTGACTGATTTTTTTTGTTGAGATTAGGTGGCGA
TTGATTGCAAGTACATTAGTTGAATGTAGTTGCATTCTCTCATATATGCACACAAAACATGTGTATGGTGAAGTAGGAAGTTTTTA
GATTGTCCAGGGAAACGAGCATTGTGGTAACG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892819 hypothetical protein ARALYDRAFT_888845 [Arabidopsis lyrata subsp. lyrata] | 1126 | 8e-121 |
| NP_172914 protein decoy [Arabidopsis thaliana] | 1121 | 3e-120 |
| AAF63174 T5E21.12 [Arabidopsis thaliana] | 1043 | 3e-111 |
| AAB48039 decoy [Arabidopsis thaliana] | 951 | 2e-100 |
| NP_001154338 protein decoy [Arabidopsis thaliana] | 879 | 4e-092 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9H2W6 39S ribosomal protein L46, mitochondrial | 184 | 6e-013 |
| Q5RBU2 39S ribosomal protein L46, mitochondrial | 184 | 6e-013 |
| Q9EQI8 39S ribosomal protein L46, mitochondrial | 176 | 5e-012 |
| Q3SZ22 39S ribosomal protein L46, mitochondrial | 169 | 3e-011 |
| Q5RK00 39S ribosomal protein L46, mitochondrial | 169 | 3e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7U3 At1g14620/T5E21_15 | 1121 | 2e-120 |
| Q9MA21 T5E21.12 | 1043 | 2e-111 |
| P93044 Decoy | 951 | 1e-100 |
| A5AFM7 Putative uncharacterized protein | 871 | 2e-091 |
| C6TCI3 Putative uncharacterized protein | 855 | 1e-089 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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