Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19586

FASTA Sequence
Unigene ID: UN19586Length: 914  SNP
GGGGTGAAAATGATCATGAGATTGGAAGTACTTTCCAGAGTCACTCAACTCTGGTGGTGGATGAGACCATGCTTGAAAAAATCCTT
GGGCCTCCAAGGTTTGATGACAGTGAAGCAGCTGATAGAGTGGCGTCAGCTGGCGTTTCGGTGGGTCTCGTGTGGACTACTTTTGG
TGGGGAGGTTCAGTTCGTGGAGGCTACATCGATGGTGGGCAAGGGGGAACTGCATTTGACTGGCCAACTAGGAGATGTTATCAAAG
AATCTGCTCAGTTAGCTCTTACATGGGTAAGAGCCCGTGCGTCGGATTTCAAGCTAGCACTTGCAGGAGACATGAATGTTCTCGAT
GGACGAGACATCCACATTCACTTTCCTGCTGGTGCTGTCCCGAAAGACGGACCTTCAGCGGGAGTGACTTTGGTAACAGCTCTGGT
TTCGCTGTTCAGTCAGAAACGCGTAAGAGCAGACACAGCCATGACCGGAGAAATGACGCTCAGAGGTCTCGTCCTACCCGTTGGTG
GCATCAAAGATAAGATATTGGCTGCACATCGTTACGGAATCAAGAGAGTGATTCTACCGCAGAGGAACTCGAAGGACTTGGTTGAA
GTACCCGCCGCTGTACTTTCCAGCCTTGAGGTGATATTGGCAAAGAGAATGGAAGACGTTTTGGAGAATGCATTTGAAGGAGGTTG
TCCATGGCGGAACCACTCTAAATTATGACAAAAACATGACCCAAAGTCCCAAAACTCTTATCGCCTCTAAGAGCCACAGGTCGTCT
TTGGCTCACTCGGTAAGGTACCATCAGAATGTCTGCATCTCCTTTGCTTTCTTTCTCTCACTCAGATCTCTCATCTGTATTTAAGT
GTGTGTATGTAATGAGTTTTAAATTTATCATCTAATTTAATTTACCCTTCTCAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863374 hypothetical protein ARALYDRAFT_494276 [Arabidopsis lyrata subsp. lyrata]11598e-125
NP_568675 ATP-dependent Lon protease [Arabidopsis thaliana]11534e-124
AAO00734 Lon protease homolog 1 precursor [Arabidopsis thaliana]11534e-124
XP_002326492 predicted protein [Populus trichocarpa]10371e-110
XP_002528799 ATP-dependent protease La, putative [Ricinus communis]10281e-109

Swiss-Prot top hits (Blast detail)Scoree value
O64948 Lon protease homolog 2, peroxisomal11532e-125
B8BDV1 Lon protease homolog 2, peroxisomal9741e-104
Q0J032 Lon protease homolog 2, peroxisomal9741e-104
P93647 Lon protease homolog 2, peroxisomal9524e-102
O04979 Lon protease homolog, mitochondrial8762e-093

TrEMBL top hits (Blast detail)Scoree value
B9MTW6 Lon protease homolog10378e-111
B9SS30 Lon protease homolog10289e-110
B9N2T5 Lon protease homolog10252e-109
A5BU86 Lon protease homolog10135e-108
Q9XKK8 LON protease homologue (Fragment)9652e-102

Arabidopsis top hits (Blast detail)Scoree value
AT5G47040.1 LON2 (LON PROTEASE 2); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase11541e-126
AT3G05790.1 LON4 (LON PROTEASE 4); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase4148e-041
AT3G05780.1 LON3 (LON PROTEASE 3); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase4067e-040
AT5G26860.1 LON1 (LON PROTEASE 1); ATP binding / ATP-dependent peptidase/ serine-type peptidase4067e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  29%
 
81  14%
 
102  29%
 
61  14%
 
91  14%

Unigene MembersMember information