|
Information for unigene UN19586
FASTA Sequence |
Unigene ID: UN19586 | Length: 914 |
| SNP | GGGGTGAAAATGATCATGAGATTGGAAGTACTTTCCAGAGTCACTCAACTCTGGTGGTGGATGAGACCATGCTTGAAAAAATCCTT
GGGCCTCCAAGGTTTGATGACAGTGAAGCAGCTGATAGAGTGGCGTCAGCTGGCGTTTCGGTGGGTCTCGTGTGGACTACTTTTGG
TGGGGAGGTTCAGTTCGTGGAGGCTACATCGATGGTGGGCAAGGGGGAACTGCATTTGACTGGCCAACTAGGAGATGTTATCAAAG
AATCTGCTCAGTTAGCTCTTACATGGGTAAGAGCCCGTGCGTCGGATTTCAAGCTAGCACTTGCAGGAGACATGAATGTTCTCGAT
GGACGAGACATCCACATTCACTTTCCTGCTGGTGCTGTCCCGAAAGACGGACCTTCAGCGGGAGTGACTTTGGTAACAGCTCTGGT
TTCGCTGTTCAGTCAGAAACGCGTAAGAGCAGACACAGCCATGACCGGAGAAATGACGCTCAGAGGTCTCGTCCTACCCGTTGGTG
GCATCAAAGATAAGATATTGGCTGCACATCGTTACGGAATCAAGAGAGTGATTCTACCGCAGAGGAACTCGAAGGACTTGGTTGAA
GTACCCGCCGCTGTACTTTCCAGCCTTGAGGTGATATTGGCAAAGAGAATGGAAGACGTTTTGGAGAATGCATTTGAAGGAGGTTG
TCCATGGCGGAACCACTCTAAATTATGACAAAAACATGACCCAAAGTCCCAAAACTCTTATCGCCTCTAAGAGCCACAGGTCGTCT
TTGGCTCACTCGGTAAGGTACCATCAGAATGTCTGCATCTCCTTTGCTTTCTTTCTCTCACTCAGATCTCTCATCTGTATTTAAGT
GTGTGTATGTAATGAGTTTTAAATTTATCATCTAATTTAATTTACCCTTCTCAC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002863374 hypothetical protein ARALYDRAFT_494276 [Arabidopsis lyrata subsp. lyrata] | 1159 | 8e-125 |
NP_568675 ATP-dependent Lon protease [Arabidopsis thaliana] | 1153 | 4e-124 |
AAO00734 Lon protease homolog 1 precursor [Arabidopsis thaliana] | 1153 | 4e-124 |
XP_002326492 predicted protein [Populus trichocarpa] | 1037 | 1e-110 |
XP_002528799 ATP-dependent protease La, putative [Ricinus communis] | 1028 | 1e-109 |
Swiss-Prot top hits (Blast detail) | Score | e value |
O64948 Lon protease homolog 2, peroxisomal | 1153 | 2e-125 |
B8BDV1 Lon protease homolog 2, peroxisomal | 974 | 1e-104 |
Q0J032 Lon protease homolog 2, peroxisomal | 974 | 1e-104 |
P93647 Lon protease homolog 2, peroxisomal | 952 | 4e-102 |
O04979 Lon protease homolog, mitochondrial | 876 | 2e-093 |
TrEMBL top hits (Blast detail) | Score | e value |
B9MTW6 Lon protease homolog | 1037 | 8e-111 |
B9SS30 Lon protease homolog | 1028 | 9e-110 |
B9N2T5 Lon protease homolog | 1025 | 2e-109 |
A5BU86 Lon protease homolog | 1013 | 5e-108 |
Q9XKK8 LON protease homologue (Fragment) | 965 | 2e-102 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT5G47040.1 LON2 (LON PROTEASE 2); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase | 1154 | 1e-126 |
AT3G05790.1 LON4 (LON PROTEASE 4); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase | 414 | 8e-041 |
AT3G05780.1 LON3 (LON PROTEASE 3); ATP binding / ATP-dependent peptidase/ nucleoside-triphosphatase/ nucleotide binding / serine-type endopeptidase/ serine-type peptidase | 406 | 7e-040 |
AT5G26860.1 LON1 (LON PROTEASE 1); ATP binding / ATP-dependent peptidase/ serine-type peptidase | 406 | 7e-040 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|