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Information for unigene UN19607

FASTA Sequence
Unigene ID: UN19607Length: 1356  SNP
GATTCGGCCCAAAAAACAAAGCAAAATAGATCATACACTGTAACAAAATGAATTAGAAGAAAAACCACAACTTGCAAAATTACAGC
AAAGATATCACAAGAAACACAAGACGCACACGTACCCATATACAAAATGAACAATATTTAATGAATATAAAACCCCCCAAAGACGC
GAGGGGAAAACCAATGAACCACGAGCACAAAGTGGCTCGTTAGGTGTCTGGGTCGATAGGGGCACCGGTTCTAGCCTGTGAGATCC
TGTTTGCGTAGATGGTCACTAGGCGAACCTGTGTGCTGTTTAGACCTTCCAAATACGGCAAGAATGCTTTCCCAAGCATTATATAT
ATGTCTACCAGACAGAACACCACTGTCTTTCGGACATCTGCACTTTGGTTCCCAAATGCTTCGAAAACCGCAGGCAAGAAAGAAGA
CAACTGATCCATTAGTTCCTGTTGCGAGAGCCTACCCACAAGCTTAGTCAAGCAATTGATGCAAGCGACGAGAGTTTTCTCATCTT
CTGTAACCAATTGTGGCACAATAACACTTAAGCATCTGAAAGGATCGTATTGGGACAAAACTGTGGTCAAACATTGCTCAGCTTCA
CTGGAAACTTTTGGAATAGAGTCCTTGGAGACATGAAGCAGCTTCTCAATCACTATCTCAACCGAATCTTCCATGGCATCTTTCTG
GCTCTTTAGCATTTCAGATATCAGAGAAAGAGCAACTTCTCTGACTGACAAATCTTCGTCATCGACCACTTCAAGAACAACCGTCA
ATATTTGATTGAAGTACTTGGTCCAAACTGATTCTTCGTTAGCTACAGAGGCTTCAATTAGTTGCTGGAGTCCAGATATCTTGCTT
GAAGAAGGGCTTCCATCACTCGCATTGATCATATGTAGAATCTGAGGAATGCTAGGTCCAGATTCCGGTGTTGGGCTAACCTTAAT
AGATGAGAGTATGTATTGACTCAAATCTAATTCGCGGGAAACCTCATTTTCATGTCTTTCTTCCATGGAATCAGCGTTTGTCATAT
TCATACCATTCTTCTCTAAACGTGGTGGAGATAAGCTATCAAAGTTTTCAACCTTGTCTGAGCTTCCATTAGGGCTAGTTCTTGAT
ATCAAATTCTGACCAGCTGAAGTAAACGTGTAATCAGAATCCTTTTGGTTCAACACATCACTAGCAGAACTTATCCCACTTCTGAA
GTTGTGATACAGCTTTTCCTGAGTTCCACTGTAAACACTTTGACCAACAACACCACCAGTGACCGTTGTTGGCTCCTGTGAAGAAC
TCCACTTCCTACCACTATCACTGTCAACGGAACCCCCAGAATACCTGCCAAGGAACATATTCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883939 hypothetical protein ARALYDRAFT_899844 [Arabidopsis lyrata subsp. lyrata]17058e-188
NP_849997 CLIP-associated protein [Arabidopsis thaliana]16815e-185
AAD24379 unknown protein [Arabidopsis thaliana]15382e-168
XP_002521154 conserved hypothetical protein [Ricinus communis]11932e-128
XP_002303094 predicted protein [Populus trichocarpa]11887e-128

Swiss-Prot top hits (Blast detail)Scoree value
Q7Z460 CLIP-associating protein 13111e-027
Q80TV8 CLIP-associating protein 13111e-027
Q4U0G1 CLIP-associating protein 13031e-026
Q99JD4 CLIP-associating protein 22951e-025
O75122 CLIP-associating protein 22922e-025

TrEMBL top hits (Blast detail)Scoree value
Q8RWY6 Putative uncharacterized protein At2g2019016813e-185
Q9SL62 Putative uncharacterized protein At2g2019015381e-168
B9S585 Putative uncharacterized protein11931e-128
B9GR98 Predicted protein11885e-128
A5AFI4 Putative uncharacterized protein11652e-125

Arabidopsis top hits (Blast detail)Scoree value
AT2G20190.1 CLASP (CLIP-ASSOCIATED PROTEIN); binding16821e-187

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
87  64%
 
112  18%
 
102  18%

Unigene MembersMember information