Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19613

FASTA Sequence
Unigene ID: UN19613Length: 857  SNP
GGCTAGCAAAAAAAATAAAAAAATAAAAATATAAGTGAATCATCTTTCTTCATCATCTCTCAAGAACAGATTTTTGACGAGCTTGA
TCGATTTAAAATTCTCAAGATCTATGGCGGAAGAGCATCGATGTCAGACGCCGGAAGGCCACCGTCTCTGCGCTAACAACTGCGGC
TTCCTCGGAAGCTCCGCCACCATGAATCTCTGCTCCAATTGCTACGGCGATCTCTGTCTCAAGCAGCAGCAACAAGCCTCCATGAA
AACCACCGTCGAATCCTCTCTCTCCGCCGTATCTCCTCCGTCGTCGGCGGAGATCGCCTCCGTCTCTTCTCCGGCGATCTCACCTC
TCGTTCAAAACCCATCAGCTGAACTAGAGGCAACGACGAAGAACGTTCCGGTGACGGTGACTCCGCCGCGGCTGACGACGACGGAG
GAGAAGCAGCTGAAACGGCCGAATCGTTGCACGACGTGCAGGAAACGGGTCGGGTTGACCGGATTCAAGTGCCGGTGCGGGACGAC
TTACTGCGGGGTCCACAGGTACCCCGAGGTCCATGGATGCACCTTCGACTTCAAATCGGCCGGTCGTGAAGAGATCGCCAAGGCGA
ACCCGTTGGTCAAAGCGGCGAAGCTTCAGAAGATTTGATCCGAGCCGTTCGATGTATTGACTTTTCTGTCTTCATTTAAACGCGTC
CGTCTCAGAGTAACCATGATGGTATCTCAGCCGTTCATCATGGGTCATTATGTAAAAGATATGTATTATCAACGGACACGTGTCAC
GTGACGCTTTCATCATGTTCCCAATTAATTTTCTTTTCCCTATAAAGAAATAAGATTATTCGCGTTAGCTTTTCTTCTCGGGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876168 hypothetical protein ARALYDRAFT_485652 [Arabidopsis lyrata subsp. lyrata]7143e-073
NP_190848 zinc finger A20 and AN1 domain-containing stress-associated protein 6 [Arabidopsis thaliana]6964e-071
AAK68811 zinc finger-like protein [Arabidopsis thaliana]6392e-064
XP_002523785 zinc finger protein, putative [Ricinus communis]4643e-044
ABK21092 unknown [Picea sitchensis]4591e-043

Swiss-Prot top hits (Blast detail)Scoree value
Q94B40 Zinc finger A20 and AN1 domain-containing stress-associated protein 66962e-072
Q6H7P8 Zinc finger A20 and AN1 domain-containing stress-associated protein 43986e-038
A2YEZ6 Zinc finger A20 and AN1 domain-containing stress-associated protein 83978e-038
A3BDI8 Zinc finger A20 and AN1 domain-containing stress-associated protein 83978e-038
Q8H0X0 Zinc finger A20 and AN1 domain-containing stress-associated protein 23951e-037

TrEMBL top hits (Blast detail)Scoree value
B9SRU8 Zinc finger protein, putative5082e-049
B9SCR6 Zinc finger protein, putative4642e-044
A9NKD1 Putative uncharacterized protein4598e-044
A9NYV7 Putative uncharacterized protein4014e-037
A8QZ71 AN144005e-037

Arabidopsis top hits (Blast detail)Scoree value
AT3G52800.1 zinc finger (AN1-like) family protein6971e-073
AT1G51200.1 zinc finger (AN1-like) family protein3969e-039
AT1G51200.2 zinc finger (AN1-like) family protein3969e-039
AT2G27580.1 zinc finger (AN1-like) family protein3942e-038
AT2G36320.1 zinc finger (AN1-like) family protein3815e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  30%
 
123  30%
 
191  10%
 
202  20%
 
211  10%

Unigene MembersMember information