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Information for unigene UN19625

FASTA Sequence
Unigene ID: UN19625Length: 687  SNP
GGAAAAAGAGGAATCCGATGCGTCAGTACAAGGGCGCGGCGAAAGCAATCTTGGAAATTTCAGTTATTTTGTTTATATAAATCTCT
CAGCCATCACTGTTTCGAAGGCATTAACTCTCGGAGAATCATAAAAAGCCCTTAAGGATGTCTGCAACACAGGAAGAAGACAAGAA
GCCCGGTGGTGGTGACGGAGGAGCTCACATCAATCTTAAGGTCAAGGGACAGGACGGGAATGAGGTGTTCTTTAGGATCAAGAGAA
GCACTCAGCTGAAGAAGCTGATGAATGCTTACTGTGACAGGCAATCTGTGGACATGAACGCCATTGCCTTCTTGTTTGATGGGCGT
CGTCTGCGTGCTGAGCAGACTCCCGATGAGCTTGAAATGGAGGATGGTGATGAGATCGATGCCATGCTCCATCAGACTGGTGGCTG
TGGTGGTGGAGGTGGCCTGACATTTATCCGGGTTTAGGGTTTCATGATGTGTGATAGGAATGGTTAAGGAGTAATCGGCATTAGGA
ATTGCAGACTTGTTTTTCTTTTTTTTTCTTAAATCGTGACCATTGGCGTTAAAAAACTAATATGGTCATGAAGGCTTAAAAAAACC
TTTTGTTAATTGTTGGTCTTGTTCCTTTGGTATTGGATCCTACTATGTTATGATAATGTTTGCTCTTAAAAATTGTTATTTAACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194414 small ubiquitin-related modifier 1 [Arabidopsis thaliana]4687e-045
NP_001045207 Os01g0918300 [Oryza sativa Japonica Group]4679e-045
CAA67923 ubiquitin-like protein [Arabidopsis thaliana]4534e-043
BAK02785 predicted protein [Hordeum vulgare subsp. vulgare]4491e-042
XP_002869590 hypothetical protein ARALYDRAFT_492116 [Arabidopsis lyrata subsp. lyrata]4453e-042

Swiss-Prot top hits (Blast detail)Scoree value
P55852 Ubiquitin-like protein SMT34683e-046
P55857 Ubiquitin-like protein SMT34674e-046
O13351 Ubiquitin-like protein pmt3/smt32793e-024
Q9Z172 Small ubiquitin-related modifier 32391e-019
Q7SZ22 Small ubiquitin-related modifier 32391e-019

TrEMBL top hits (Blast detail)Scoree value
Q547B9 Small ubiquitin-like modifier 14685e-045
A2WYE1 Putative uncharacterized protein4676e-045
Q0JGK7 Os01g0918300 protein4676e-045
B4FNC9 Putative uncharacterized protein4344e-041
B6T938 Ubiquitin-like protein SMT34344e-041

Arabidopsis top hits (Blast detail)Scoree value
AT4G26840.1 SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag4773e-048
AT5G55160.1 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag4316e-043
AT5G55160.2 SUMO2 (SMALL UBIQUITIN-LIKE MODIFIER 2); protein binding / protein tag3473e-033
AT5G55170.1 SUMO3 (SMALL UBIQUITIN-LIKE MODIFIER 3); protein binding / protein tag2434e-021
AT5G55856.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: protein modification process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Ubiquitin (InterPro:IPR000626); BEST Arabidopsis thaliana protein match is: SUMO1 (SMALL UBIQUITIN-LIKE MODIFIER 1); protein binding / protein tag (TAIR:AT4G26840.1); Has 781 Blast hits to 780 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 477; Fungi - 93; Plants - 124; Viruses - 1; Other Eukaryotes - 86 (source: NCBI BLink).2192e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
712  75%
 
62  13%
 
112  13%

Unigene MembersMember information