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Information for unigene UN19632

FASTA Sequence
Unigene ID: UN19632Length: 1292  SNP
GCATGAAATAAAAAGAAGCATCTTAGAGAAAGAGAAAAGAGCGAGAGAGATTGAAAGCTTTAGGGTTTAAAAAACTGACTCTTTAG
AAAGTCTTTCTACGTGAAAATCTTCTTCTCCATATCTTTAGAAAATGGGCATCATGATCAACTACCATTTGCTCGCTATCGTCTTC
GGCATCTTAGGAAACGCAATATCCTTCCTCGTATTCCTCGCTCCAGTGCCTACGTTTTATAGAATATACAAGAAAAAGTCGACAGA
AAGTTTCCAGTCTCTACCGTATCAAGTGTCGCTATTTAGCTGCATGCTATGGCTCAGTTACGCATTGATTAAGCAAGACGCTTTTC
TCCTAATTACCATCAACTCCTTCGGATGCGTCGTGGAGACTATCTACATCGCCATCTTCTTCACTTACGCTACCAGGGAGAAAAGG
ATCGCGGCTATGAAGTTGTTCTTAACGATAAATGTTGCGTTCTTCTCGTTGATTATAACGGTTACACATTTCGCCATTAAAAGTCT
TAGCCTCCAAGTCTCTGTCCTCGGCTGGATATGCGTTGCCATTTCAGTATCTGTTTTCGCTGCCCCTCTAATGATCGTGGCGCGTG
TTATAAAGACAAAGAGTGTGGAATTCATGCCTTTCACGCTTTCTTTCTTCCTCACCATAAGCGCGGTTATGTGGTTTGCTTATGGC
TTGTTCCTTCATGACATATGCATAGCTATTCCAAACGTGGTGGGATTCATACTAGGGATGGTACAAATGATTTTATACGGAGTTTA
CAGAAATTCAGGGGAGAAATTAGATATTGAGAAAAAAATGAATCCATCAGAACAACAACTTAAAACTATTGTCGTGATGAGTCCGT
TGGGTGTGTCAGAAGTGCACCCCATTGACGTCAAAGTGACTGAGCCGGTGGTCCCCTTTTCTGATGTAGTTCAACATGAAGATCCA
TCCAAAGTTACTAACGAGGTGACAGGAATCCATGACGTAAAGTGCCTCGTAGAGATTGTCCATCGTGAAACTGTCTGAAGTGTCAA
ATGTATTGCAACAAGAAACGAAATATATATCTCTCCCTCACCCTTTCTCTTTCTCTTGGGCCTTGGCTCGTCGGCTGGCCGAAAGA
AGAAATTGTATCAATTGGTGGTTTGGTTCCATTTTTGTTTCTTATGTTATTTAGTATCATTGATGTATTTGCATTAAGTTCTATGT
TATAAAATTTATCTTTTTAAAGTGAATATTTTAAAGTGAATATATTGCGCACAGAAAAAAATAAAATGAATATATTATCTGTGTAA
GG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873602 nodulin MtN3 family protein [Arabidopsis lyrata subsp. lyrata]11922e-128
NP_196821 senescence-associated protein 29 [Arabidopsis thaliana]11582e-124
AAM65389 senescence-associated protein (SAG29) [Arabidopsis thaliana]11511e-123
ACU24541 unknown [Glycine max]8096e-084
XP_002303766 predicted protein [Populus trichocarpa]7962e-082

Swiss-Prot top hits (Blast detail)Scoree value
Q8LFH5 Protein RUPTURED POLLEN GRAIN 14061e-038
Q54JW5 RAG1-activating protein 1 homolog2367e-019
Q290X1 RAG1-activating protein 1 homolog2313e-018
Q9CXK4 RAG1-activating protein 12251e-017
Q5EB14 RAG1-activating protein 1 homolog2223e-017

TrEMBL top hits (Blast detail)Scoree value
Q9FY94 Putative senescence-associated protein SAG2911581e-124
Q8LAG0 Senescence-associated protein (SAG29)11518e-124
C6TNP9 Putative uncharacterized protein8094e-084
B9GZC5 Predicted protein7961e-082
B9RM94 Putative uncharacterized protein7933e-082

Arabidopsis top hits (Blast detail)Scoree value
AT5G13170.1 SAG29 (SENESCENCE-ASSOCIATED PROTEIN 29)11587e-127
AT5G23660.1 MTN3 (Arabidopsis homolog of Medicago truncatula MTN3)6523e-068
AT5G50790.1 nodulin MtN3 family protein6443e-067
AT3G48740.1 nodulin MtN3 family protein6292e-065
AT5G50800.1 nodulin MtN3 family protein6076e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  45%
 
114  36%
 
82  18%

Unigene MembersMember information