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Information for unigene UN19633
| FASTA Sequence |
| Unigene ID: UN19633 | Length: 1443 |
| SNP | AAAAACCCAATTCTCATCTGCGCATTATACTGTTACTTGAAACAAGAAATCTCGACTTACAATCTTTTCCTGATCTATGCTACTAA
GACAAAAGAGTGTTTACATGTAGGCTTAAGCTTTGTCTTGGAAGTAATAAAGAATCTAGATGAAATCTTTAGAGGAGCAAGAGGTC
ACACAACTCAAATCTAGTTTCTTTAGAATCTTAATAGGAGCAAGAGTCTCAAACAACTCAACTCAAGGTATATGTGTTGCCATGAA
CTAAACAATGTACCGCCGCCACTTCTTGGTTTGTGTCCCTTAGTATCTAATTGGTCCGTCAAGGCTACCTGTAGCAAACTGTTGAA
CTATTGGATTAGTTGAGGTTGTAAATTCATGAGTCATGCCTTGCCAGACGATTTTTCCTTTATACAGAAACAATAACCTGTCTACA
GCTCTTTGAATGGTGCTATGTTGATGGGTAACAACCAAATAAGAGGCGATCTTCCCAGGTTTCCCAAGTGAATCCTCCTCCCCCGT
CAAGTGAACAGATCGTATAAGATCTTCAACTACAGTTGATGCAATGGGATCAAGTCCAGCTGTTGGCTCATCGTACAAGAGCACCT
CTGGCTCTATGACCTCCTTTGTTGTATCGAAAACAAGTGAACGAGCTAAAGCAACCCTTTTCTTCACCCCACCAGATAGCTCAGAA
GGTAGTCGATTCTCAACACCCTTCAAACCAACAGCTGCCAAGGTCTGTGTCACAAGCTCAGATATTTGATTCTCAGACATTTTTGA
ATTTTCATAGAGTAGAAAACCAACATTTTCACGAACTGTAAGAGAATCAAAGAGAGCTGCACTCTGAAAAACAAGGCCAATACGAA
GCCCTGATATCTCCTCATCACTTATCAAACCAGCTCGTTTCTTTCCCTCGTATATAAACCTCTCCCTTGTCTGGAGCAAGAAGACC
AGCCATGATCTTTAAAATGGTTGATTTTCCAGTCCCAGAAGGACCAATCACCCCAACAGCTTCGCCATGTCTAATCTTAAAGGAAA
CACCTTTCAAGATATGTTTATCCCCAAATGATTTGTAGACATCTCGACATTCTATTAGAACATCAGAATCATCCCCAGGCTCACGC
AAACCTCCTCCTGACTTTGATAGACTATTGAATTTGGTGGCGGTGGAACAGCAAAAGACTTTCCGACTAATACTTCTTCTTCTGGA
CATAGCGATGGATTGGTGGGAAGAAGCATGGAAGTGTAAACTTGGACGAAGCAAAGAAGAAGAAGAGGATAAAGAAAGCATGATTC
TGGGGGGTTTGAGATCTTTGAAGAATGGGATCGAAGATGCACCAATTCGGTGCCGATTTGGAGAAATTGACACAGAAGAATCCAAA
GTGTGGGCTTTGCAGCGTCACACTTCTTTGCTGGGAAATATTAGCTTTTTTTTTTCTGCTTCCCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564850 protein triGALACTOSYLDIACYLGLYCEROL 3 [Arabidopsis thaliana] | 951 | 2e-100 |
| XP_002886917 ATNAP11 [Arabidopsis lyrata subsp. lyrata] | 951 | 2e-100 |
| AAC27147 Contains similarity to ABC transporter gb|1651790 from Synechocystis sp. gb|D90900 [Arabidopsis thaliana] | 894 | 9e-094 |
| NP_001146726 hypothetical protein LOC100280328 [Zea mays] | 876 | 1e-091 |
| ACU19761 unknown [Glycine max] | 873 | 2e-091 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9AT00 Protein TRIGALACTOSYLDIACYLGLYCEROL 3, chloroplastic | 958 | 1e-102 |
| P45031 Uncharacterized ABC transporter ATP-binding protein HI_1087 | 227 | 8e-018 |
| P63388 Probable phospholipid import ATP-binding protein mlaF | 202 | 7e-015 |
| Q5Z0P5 Aliphatic sulfonates import ATP-binding protein SsuB 1 | 174 | 1e-011 |
| Q5X627 Spermidine/putrescine import ATP-binding protein PotA | 169 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B8A384 Putative uncharacterized protein | 876 | 8e-092 |
| C6TD59 Putative uncharacterized protein | 873 | 2e-091 |
| C5X5U1 Putative uncharacterized protein Sb02g011310 | 867 | 8e-091 |
| B8AP35 Putative uncharacterized protein | 863 | 2e-090 |
| B9RFV1 Abc transporter, putative | 863 | 2e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G65410.1 ATNAP11 (ARABIDOPSIS THALIANA NON-INTRINSIC ABC PROTEIN 11); transporter | 959 | 1e-103 |
| AT5G64840.1 ATGCN5 (A. THALIANA GENERAL CONTROL NON-REPRESSIBLE 5); transporter | 131 | 1e-007 |
| AT2G13610.1 ABC transporter family protein | 127 | 3e-007 |
| AT4G33460.1 ATNAP13; transporter | 127 | 3e-007 |
| AT5G39040.1 ATTAP2; ATPase, coupled to transmembrane movement of substances / transporter | 124 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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