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Information for unigene UN19635
| FASTA Sequence |
| Unigene ID: UN19635 | Length: 1155 |
SSR | | GGAGAGATACAAAAAGTTTAACATCTTCCCCTCTCTCTCTTTCTTGGTGGCCTTTCTTTTTCCTTTGGGTTTAGTGGTGGGGGTTC
TCTCTATAAAACATTTTCGCAACTATATATAAATAAAAATAATAATCTGGTTTTATATAAAATAGCAAAAGAGATGCAACAGCACC
TGATGCAGATGCAGCCCATGATGGCTGGTTACTACCCCAGCAATGTCACCTCTGATCATATCCAGCAGTACTTGGACGAGAACAAG
TCTTTGATTCTGAAGATAGTTGAGTCTCAAAACTCTGGAAAGCTCAGCGAGTGTGCCGAGAATCAGGCAAGGCTTCAACGCAACCT
GATGTACTTGTCTGCAATAGCAGATTCTCAGCCTCGACCTCCAAACGTGCATGGCCAGTATGGATCTGCTGGTGGTGGGTTGATTC
AAGGAGAAGGAGCGTCACACTATTTGCAGCAGCAACAGGCGACTCAACAGCAGCAGATGACTCAGCAGTCTCTTATGGCAGCTCGT
TCTTCGATGATGTATGGTCAGCAGCAGCAACAGCCTTATGCAACGCTTCAGCATCAGCAGTTGCACCATAGCCAGCTGGGGATGAG
CTCTAGCAGCGGAGGAGGAAGCAGTGGTCTCCATATCCTTCAGGGAGAGGCTGGTGGGTTTCATGAGTTTGGCCGTGGGAAGCCGG
AGATGGGGAGTGGTGAAGGCAGAGGAGGGAGCTCAGGGGATGGTGGAGAAACACTCTACTTGAAGTCATCAGATGATGGGAACTGA
AAGAGTGTGGCACAAGTAAGTCCAGTGAAGAAGAAGTAGTAGTAGTAGTAGTATGTGTCTGAAGTTTGTGTGTTTTGGTTTAGTTG
CTTGTCGAAGAAGCAAAGAACTCGTATTTACGTTTTAGTGTTTTTTTTTTTTAATTTTCTCTATGTTTGTTCCCTAAAAGTATGAA
CTCTTACGTGGTGTAGTGTACCAAGCAGATCTGCTCGCTACAAGTTGTGTCGTAATCCTAGTATGTTATTTCTTAGAACGATACAT
GAGTCTACTCTTTCGCTTGAGCAATAATTTCTAGAGATCCTTGTTTGTGAAATGTGACGTAATTTGAATTTGGTTCGGTTATCAAC
CACAACCTTTCTTAATGACCAATTATCTTGTCTGCAC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002874431 hypothetical protein ARALYDRAFT_910943 [Arabidopsis lyrata subsp. lyrata] | 989 | 6e-105 |
| NP_198216 transcriptional coactivator-like protein [Arabidopsis thaliana] | 988 | 8e-105 |
| XP_002319091 predicted protein [Populus trichocarpa] | 647 | 3e-065 |
| XP_002521950 synovial sarcoma associated ss18 protein, putative [Ricinus communis] | 630 | 3e-063 |
| XP_002332027 predicted protein [Populus trichocarpa] | 592 | 7e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O75177 Calcium-responsive transactivator | 141 | 6e-008 |
| Q8BW22 Calcium-responsive transactivator | 138 | 1e-007 |
| Q91XJ0 Calcium-responsive transcription coactivator | 138 | 1e-007 |
| Q15532 Protein SSXT | 137 | 2e-007 |
| Q5RFQ1 Protein SSXT | 137 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L8A5 GRF1-interacting factor 1 | 988 | 6e-105 |
| B9I5L4 Predicted protein | 647 | 2e-065 |
| B9S7I1 Synovial sarcoma associated ss18 protein, putative | 630 | 2e-063 |
| B9N9U1 Predicted protein | 592 | 5e-059 |
| C6TGJ5 Putative uncharacterized protein | 562 | 1e-055 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G28640.1 AN3 (ANGUSTIFOLIA 3); protein binding / transcription coactivator | 989 | 2e-107 |
| AT1G01160.1 SSXT protein-related / transcription co-activator-related | 255 | 3e-022 |
| AT4G00850.1 GIF3 (GRF1-INTERACTING FACTOR 3); protein binding / transcription coactivator | 252 | 7e-022 |
| AT1G01160.2 SSXT protein-related / transcription co-activator-related | 211 | 4e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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