Information for unigene UN19636
| FASTA Sequence |
| Unigene ID: UN19636 | Length: 1946 |
SSR | | GGACCACCCAACCAATCACAAGACCTGACTCCTCTTGAAATTTTCTGAACAAAGCAAAAGAGAAACAATTTAATGGCGGCCATGAA
CTCGAGTGTTCTCACATGCAGCTACGCAATCTCTGGAGCTAGCTCAGCAGAGCTGAACCAGAAAGTTGGTTTGGTGAATTCATCGG
TTGGGTTTGGTCAAAAGAAACAGACGCTTCCTATGATCAAAGCTCAACAACGAGTTGGTGGTGATGATGTTAATGGAAGAAGATCC
GCAATGGTGATCTTAGCTGCTACACTCTTCTCCTCTGCTTCTGCTAATGCTGGTGTCATCGATGAGTATCTTGAGAAGAGCAAAGC
CAACAAAGAACTGAATGATAAGAAGAGATTGGCAACAAGTGGAGCAAACTTTGCGAGAGCATTTACTGTCCAGTTCGGAAGCTGCA
AGTTCCCTGAGAATTTCACTGGTTGCCAAGATCTTGCCAAGCAAAAGAAAGTACCATTCATCTCAGAAGATTTGGCGTTGGAATGC
GAAGGCAAAGACAAGTACAAGTGTGGTTCCAATGTTTTCTGGAAATGGTGATCATGTTTTGTTGTCTTTTTTAAATCCATTCTTTG
TATAAACTCAACAGTGTATCTCTCTCTCTCTTTATTCATCAAAGTTCTCATACTCATTTGAATCTATAAAGTGAATATTGAGAGAA
TAATATTATTGCACATAAATAAAAGACACCAAAGAAAACTCTCAGTGTGTAATGAAACATTATTCCTTCTGGTGGTGGTGAAAAGA
CACAATGAGTTACAAAGAAAACAAAGGAAAGAATCAGAGAGATGAAGCTTCTTTCTCTTGCTCAGCGATGGAGTCACGAACAGCTT
TCAAAAGCAGAGGCATTAGCTTCTCATTAGCAACAATAATCCCTGTCTCCAAATCAAGATACTTCCCTTTCGAGAAATCCAGTGCC
TTTCCACCTGCATCCGTCACTATCCCACCAGCCTCTGTAACAACTATAGCACCAGCTACATGGTCCCAAATCTTCTCGCGGTATCC
TTTGTGAGGGAACCTCAAGTATATAGCTCCATCTCCTCTAGATAAAGCTCCATACTTTGCTTGGCTATCGATACGCACTGGTGGCG
CTTTCACACCAAGTTTATTGGCAATGGAGCTGGATAGATCATGAAGAGAGTGAGCTCCTTCAAATGATTCAAAGAAGGATGCATCT
TCAGGATTCTCAACGCTAGAGACATGTACTTTGACCGGATCAGTTTTCGAATCCAAAGGCTGCATGTACGTCCCTGAACCGATTGT
AGCATAGAAGAGACATCCTTTTCCTCTGAAGAAGAGTTCTTGTTGCTGTTTCTGCTATGGAAGCCAATGGCAAGTTTGGACAAGCA
AGCACACCCAACACTACTTTCCCTTCATCTAGCAATCCTAGCGCTACCGCGTACTGATCTCCCCTCAAAAATCCTTTAGTGCCATC
AATAGGATCCAAGACCCAGTGTCGACCGTTAGGACCACCTTCGGATGTGCCGCAGTCAATGGCTCTGAGAAGATCATCAGTTGATA
AAGCAGAGTCAATGGGTTTGAGTAGATCCTCATTAGCCAAAGTGTCGTTGACGAGTTTTGTGATGCGCTCAAGAATATCTTGAGAA
CCATCCTTGCGTAGATCAGCTGAGTCCTCTTCAGCCACCAATGAAAAGGGTTCAGAGCTGAGTTCTCTTTGTAAGAGTAAACTAAC
AACTGCTTGTGAACCATAATCAGCAACGGTGACTGGACTTTTATCTGATTTTGATTGAACATCAGACTGCAACAAAGCCTTTTGAA
CTTTCTGACAGAGGCGAGCTGCTAGTGAAGCGGCTTTCTTAGCGGCATCAAGCTCTTTCTCGTACGCCATATCTTGAAACTATAAT
CTGAGAGTAACAGATAAAGGGGACGACTTTCTTCCGGATAAAGACACGATACGG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201203 inositol polyphosphate 1-phosphatase [Arabidopsis thaliana] | 837 | 5e-087 |
| BAJ33755 unnamed protein product [Thellungiella halophila] | 828 | 6e-086 |
| Q42546 RecName: Full=SAL1 phosphatase; AltName: Full=3'(2'),5'-bisphosphate nucleotidase 1; AltName: Full=3'(2'),5'-bisphosphonucleoside 3'(2')-phosphohydrolase 1; AltName: Full=DPNPase 1; AltName: Full=Inositol polyphosphate 1-phosphatase 1; Short=IPPase 1; AltName: Full=Inositol-1,4-bisphosphate 1-phosphatase 1; AltName: Full=Protein FIERY 1 | 777 | 5e-080 |
| XP_002864880 hypothetical protein ARALYDRAFT_496591 [Arabidopsis lyrata subsp. lyrata] | 773 | 1e-079 |
| XP_002866588 photosystem I reaction center subunit psi-N [Arabidopsis lyrata subsp. lyrata] | 735 | 4e-075 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q42546 SAL1 phosphatase | 802 | 3e-084 |
| P49107 Photosystem I reaction center subunit N, chloroplastic | 733 | 3e-076 |
| O49623 SAL2 phosphatase | 607 | 1e-061 |
| P0C5A3 3'(2'),5'-bisphosphate nucleotidase | 592 | 6e-060 |
| Q2QWT4 3'(2'),5'-bisphosphate nucleotidase | 592 | 6e-060 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WTT5 3'(2'),5'-bisphosphate nucleotidase | 802 | 4e-083 |
| B9H494 Predicted protein | 646 | 5e-065 |
| B9HES8 Predicted protein | 645 | 7e-065 |
| C6SXP5 Putative uncharacterized protein | 610 | 8e-061 |
| C6SVX7 Putative uncharacterized protein | 608 | 1e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G63980.1 SAL1; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase | 837 | 2e-089 |
| AT5G64040.1 PSAN; calmodulin binding | 734 | 2e-077 |
| AT5G64000.1 SAL2; 3'(2'),5'-bisphosphate nucleotidase/ inositol or phosphatidylinositol phosphatase | 607 | 9e-063 |
| AT5G63990.2 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative | 591 | 7e-061 |
| AT5G63990.1 3'(2'),5'-bisphosphate nucleotidase, putative / inositol polyphosphate 1-phosphatase, putative | 591 | 7e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
| Software error:
can't close file: No space left on device at /var/www/cgi-bin/radish/EST/search.cgi line 576.
For help, please send mail to the webmaster (feibioinfolab@gmail.com), giving this error message
and the time and date of the error.
|
