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Information for unigene UN19638

FASTA Sequence
Unigene ID: UN19638Length: 1221 SSR 
GGTGTAAAAAAACAATATTTGAAAAGTATGTCTACATATAATTTTCTCTATTAATGAGCACACCTCGTTATTACCAAGTAACATGA
ACTGCATATATCGTGCATGCATTGTAAAGCAACGTAATTAGTATGAAAATGTAGTCGCAACTATATACTACTTAGTAACAAGAATT
AGTGTTTGCGCTTGGACTTCGAGGAAGTGAGGGAATGAGAGTTGTGCCAATTCCTCTTGCGTTGATTAATGAACCAATTGTTGATT
TGCTTTAACTGTAATCCGGTCTCCTCTACCAATTTTGCCTTGTCATCTTCAGTAGGGTAAGGCCACTTGCAATGTTGTTGCCACCA
ATTTTTCAAGACAGTGGTTGTGTCCCCAGGTAATTTCCCAGCCCTTCTTTTCCTCATTATCTCTTCTCTTACATCTTCAATTCTCG
ATTTAAAACCCTGTTTGAGTTCGAGTTTAAGTTCTTGTCTGACTCTTTCCATAAGAGATCTTTCTGATTCAGTCGGAAGCAATGGA
CCGAATCCCGTCATATCATGGCCGCAGCTGAGATCGGAAGTATCCGATGAAAAACCCATCTGAAAATCGTCCTCGTCTTCGGACAT
CGTGGCACCGGACCCTTCTCCTAATATCGCTCCTGTGAGAGAGTGGAGGTTGTTCTCAATTTCACGGCAAGCCATCACAGCTTCGA
CGGCATGAACCCTCACGTGTTGTTGCAGCTGTTCTTTGAAGCTACACAACACCATCACATATTGTGCCAAGAAATTGTCGAGCTCG
TGACGATCATGATGCGAGAATCCAACGGCTGTGGAAGCATAAGATCGGAGAAGATGTTGAGAGCGAGAAAGCTGAGCTTCAATGAT
TGGAAGCTGATCGATCGGAGTCGCTACTCTCAGACATGCCACATGGGCAGCCAATAATTGCTCGTACATGGGATGTGTCGCGATCT
CTCCTTTCATCTGTCTATTTTGCTCCACTACTAAGACTGCGTCTCCGTCTCCTCCACCTACTGTGGCTCCGATCATACCTAACGCC
GATTCTTGCATATATTCTTGATCGAAGGCGGAGCTAGTTTTCCTGAAAACCCTAGTTCTTGAACCCGATTTTGTGTGTACGATTAG
CTCAGAGAGAGAGAGAGAGAGAAAAAGGGGGATTTTGAGGGAAACAAGACCAAACGAGGATGATGAAATTGAAAATAAATTGAATT
GGTTCAAATGTTTCCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
P46606 RecName: Full=Homeobox protein HD114045e-153
NP_564805 homeobox protein knotted-1-like 7 [Arabidopsis thaliana]13751e-149
XP_002887986 hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp. lyrata]13732e-149
BAC42940 putative homeodomain transcription factor KNAT6 [Arabidopsis thaliana]13454e-146
AAF75812 Strong similarity to Homeobox Protein HD1 from Brassica napus gi|1170191, and contains a lactate/malate dehydrogenase PF|00056 domain [Arabidopsis thaliana]13401e-145

Swiss-Prot top hits (Blast detail)Scoree value
P46606 Homeobox protein HD114042e-154
Q9FPQ8 Homeobox protein knotted-1-like 713755e-151
Q94LW3 Homeobox protein knotted-1-like 310332e-111
O04136 Homeobox protein knotted-1-like 39401e-100
P48000 Homeobox protein knotted-1-like 39355e-100

TrEMBL top hits (Blast detail)Scoree value
B9RC00 Homeobox protein knotted-1, putative11543e-124
A5Y4G9 Class II KNOX homeobox transcription factor11284e-121
A9P848 Putative uncharacterized protein11284e-121
B9GKQ8 Predicted protein11284e-121
C6TBT2 Putative uncharacterized protein11006e-118

Arabidopsis top hits (Blast detail)Scoree value
AT1G62990.1 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor13763e-152
AT5G25220.2 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor9364e-101
AT5G25220.1 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor9355e-101
AT5G11060.1 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor9249e-100
AT4G32040.1 KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE 5); transcription activator/ transcription factor8593e-092

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  75%
 
81  13%
 
101  13%

Unigene MembersMember information