 |
Information for unigene UN19662
| FASTA Sequence |
| Unigene ID: UN19662 | Length: 688 |
SSR | SNP | CTCTCAATATTCACTTTATAGATTCAAATGAGTGTGAGAACTTTGATGAATAAAGAGAGAGAGAGAGATACACTGTTGAGTTTATA
CAAAGAATGGATTTAAAAAAGACAACAAAACATGATCACCATTTCCAGAAAACATTGGAACCACACTTGTACTTGTCTTTGCCTTC
GCATTCCAACGCCAAATCTTCTGAGATGAATGGTACTTTCTTTTGCTTGGCAAGATCTTGGCAACCAGTGAAATTCTCAGGGAACT
TGCAGCTTCCGAACTGGACAGTAAATGCTCTCGCAAAGTTTGCTCCACTTGTTGCCAATCTCTTCTTATCATTCAGTTCTTTGTTG
GCTTTGCTCTTCTCAAGATACTCATCGATGACACCAGCATTAGCAGAAGCAGAGGAGAAGAGTGTAGCAGCTAAGATTACCATGGC
TGATCTTCTTCCATTAACATCATCACCACCATCTCGTTGTTGAGCTTTGATCACAGGAAGCGTTTGTTTCTTTTGACCAAACCCAA
CTGATGAATTCACTAAACCCACTCTCTGGTTCAGCTCTGCCGAGCTACCACCAGAGATTGCGTAGCTGCATGTGAGAACACTCGAG
TTCATGGCCGCCATTTTGTTTCTCTTTTGCTTTGTTCAGAAAATTCAAGAGTAGTAACTAGTAAGGTCTTGTGATTGGTTGGGTCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33864 unnamed protein product [Thellungiella halophila] | 754 | 5e-078 |
| XP_002866588 photosystem I reaction center subunit psi-N [Arabidopsis lyrata subsp. lyrata] | 727 | 6e-075 |
| NP_201209 photosystem I reaction center subunit N [Arabidopsis thaliana] | 725 | 1e-074 |
| XP_002526638 Photosystem I reaction center subunit N, chloroplast precursor, putative [Ricinus communis] | 604 | 1e-060 |
| ACU14018 unknown [Glycine max] | 597 | 7e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P49107 Photosystem I reaction center subunit N, chloroplastic | 725 | 5e-076 |
| P31093 Photosystem I reaction center subunit N, chloroplastic | 445 | 1e-043 |
| O65107 Photosystem I reaction center subunit N, chloroplastic (Fragment) | 426 | 2e-041 |
| Q9SBN5 Photosystem I reaction center subunit N, chloroplastic | 273 | 1e-023 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SKW9 Photosystem I reaction center subunit N, chloroplast, putative | 604 | 8e-061 |
| C6SXP5 Putative uncharacterized protein | 597 | 5e-060 |
| C6SVX7 Putative uncharacterized protein | 595 | 9e-060 |
| D2K7Z2 Photosystem I reaction center subunit | 564 | 3e-056 |
| D5L5T1 Putative photosystem I reaction center subunit | 543 | 9e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
