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Information for unigene UN19669
| FASTA Sequence |
| Unigene ID: UN19669 | Length: 1095 |
SSR | | GAAAGATGAATTACTCAAAAGGAAAACAATTCTTTCAGCTCATAAAATTTTAACACTGAATCACACATAGAGTCACTGACATACAT
ATGACAAATTCACTAGAGTCTTCCAAAACCCCAGATCGATTTCAAGTTTTTACACAGAAAAAACACAGAGAGTTTCCATAGATATT
AGCAGATTTGCATGCTCTTCTAACTGTTGTCTGATTTCTCCAGAGTGTTGTAGTTGAGAAGCTTCTCAATCAGATCAACGTGTGTC
ATTAGCATACGCCTGCAGCAGTATCTAACTAAGTTGAGCGCATCAAGTGCGTCCCCTTCAGTGTAGTCAAGCTGGAGAAGATCGAG
ATAGGCATCCCACTTGTTTCCAATCACCTTTCCGCATGTAAAGCATCGTACAGGGATAATCATCTTCTCGAGCTAGGAACTGTGAA
TCTGTAGACTTGGGTCTGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCAAAATGAAGCTT
TCTATGCGTTTGATCTCAGCTGTTTTCCCCTTGTTCATGATATTCGTTGCCACAGGGATGGGTCCAGTCACAGTGGAGGCACGCAC
GTGTGAGTCGAAGAGCCATAGGTTCAAGGGTACATGTGTGAGCACAACAAACTGCGCAAACGTGTGCCACAACGAAGGCTTTCCTG
GTGGGATGGGTCCAGTCACAGTGGAGGCACGCACGTGTCAGTCGAAGAGCCATAGGTTCAAGGGTACATGTGTGAGCACAACAAAC
TGCGCAAACGTGTGCCACAACGAAGGCTTTCCTGGTGGTAATTGCCGTGGATTCCGTCGTCGTTGCCTTTGCACAAGACATTGCTA
ATCCATCAATCGATTCTCATAACTCAAAATCCTCGATCCATCGTCTCGTGTTGTTTCTTTCTATCTAATCTTCCGCACAGCACTGA
GTCGTACTTGTGTGTGTGATGTGTTTTCAAATAAGTCTTTGGTTTGTGTGTTTTCTTTTTTTTTATGTAACGTAAGTGTGTTTTCG
TTAGTCATGTAAGGTTATATCAACTTGTGGTTCTCTAATCAAGAAGCCTCTACGAAGGTATTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q39290 RecName: Full=DNA-directed RNA polymerases I, II, and III subunit RPABC5; Short=RNA polymerases I, II, and III subunit ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed RNA polymerase III subunit L; AltName: Full=RPB10 homolog | 381 | 2e-034 |
| NP_849640 DNA-directed RNA Polymerase II subunit L [Arabidopsis thaliana] | 370 | 4e-033 |
| XP_002326311 predicted protein [Populus trichocarpa] | 356 | 1e-031 |
| XP_002263065 PREDICTED: hypothetical protein [Vitis vinifera] | 356 | 1e-031 |
| BAJ94836 predicted protein [Hordeum vulgare subsp. vulgare] | 351 | 6e-031 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39290 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 381 | 8e-036 |
| Q9SYA6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 344 | 2e-031 |
| Q55AB6 DNA-directed RNA polymerases I, II, and III subunit rpabc5 | 313 | 6e-028 |
| Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 305 | 5e-027 |
| Q6QN04 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 305 | 5e-027 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LFJ6 At1g11475 | 370 | 2e-033 |
| A9PF10 Predicted protein | 356 | 1e-031 |
| A9NJU8 Putative uncharacterized protein | 350 | 5e-031 |
| C6T2Z9 Putative uncharacterized protein | 350 | 5e-031 |
| Q1EP53 DNA-directed RNA polymerase II 8.2 kDa polypeptide, putative | 350 | 5e-031 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G11475.1 NRPB10; DNA binding / DNA-directed RNA polymerase | 371 | 1e-035 |
| AT1G61700.1 DNA-directed RNA polymerase II, putative (RPB10) | 344 | 1e-032 |
| AT2G02100.1 LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase inhibitor | 301 | 1e-027 |
| AT2G02130.1 LCR68 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68); peptidase inhibitor | 294 | 9e-027 |
| AT2G02120.1 PDF2.1; peptidase inhibitor | 279 | 5e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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