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Information for unigene UN19670

FASTA Sequence
Unigene ID: UN19670Length: 1634 SSR 
GGATAGATTAAAAAAACATAGGGATCGCTTCACCGTGGGCTCCTCACTGTTCTTTCGTCTTCTCCGGCGATTGTTTCCCTTTCCTC
TCGAATTCTCGTCTCCGTTAAGGCTTTCACAAGTTAACATCAGAAAGTTAATGCACTAAGTATTGGGGGAAAGAGATGAGCTTTAC
TCAGGCCAATTGTTTTAGACCATCCTACCACTCTCCTGTGACAACGAGGATACCTAAAGCTAATGGTGTCTCCACCAGTGTACCTG
TTAGAGCAACTGCTTCGGTGTCTACTCTGTTTTCGCCTCTGTTAAGTCACCGGCGTAGTGGGAAATGGAAGCAAAGTTCTGCTGTT
TGCTTGTTTGGTGGTGGCAAGGATAAGTCCAATGGTGGCGGTGACGAGATATCACCATGGAAAGCAATAGAGAAAGCTATGGGGAA
GAAGTCAGTTGAAGATATGTTACGGGAGCAGATTCAAAAGAAAGATTTTTATGATACTGAAAGCGGCGGCGGCAACGTTCCTCCAC
GTGGAGGAGGAGGCGGTGGTGGTAACGGTGGAGAGCGTCCTGAAGGATCAGGAGGAGAAGAAGACGGTGGTGTCGCTGGGATTGCT
GAAGAGACTCTGCAAGTGGTTTTAGCCACCTTAGGCTTCATCTTTTTGTACACTTACATTATCAATGGGGAGGAGTTGATAAAACT
TGCAAGAGATTACTTTAGGTTTCTTTCGGGGAAACCTAAGACCGTTCGGTTGACACGAGCCTTGGATGGTTGGAATAGATTCATGG
CGACGATGTCGAAGCCCAAAGAGTATGATGAGTACTGGCTAGAGAAGGCGATCATCAACACGCCTACCTGGTACGACAGTCCCGAG
AAGTACAAGCAAGTCCTCAAGGCTTATGTCGACTCAAAGACTGATGAACAGTTCGATTAAACCCCTTGTCAGTTTCACTTTTGTTT
ACTCAGTACCTATTCACAATCACAATTGAGGTTTTCTTTGGTTTATCGTAAGGCTTTTCAAATAAATGATCCTGTTCTTGAATGTT
AATATCTTTCAAAATTCAGTTTATAAGTAAAAATTGCAGGTCAAATGAGATTACATTAAAAAAAGAGAGAACATCAAATTTTCTTG
GGTTTAGTAGAGGTTGAAGTGCTTTCTTTCTTGTCTGCCTCTGTTGATTTCTTACGGTCTTTCCTCTCCCTCTTCTTCAAAGCAGT
CATGTGTGCTTTAAGGATGGTGGCATATGATGCTTGAAATCTCTGGTGATCCTTAGCCCCAACCGAAGTAGAAATAGTTTTCTTGG
CATCAGTAGCTCGAATAAGGCATCTGTACTCTATGGATTCACCTGCCTCGCTCAGTTTCCTCTTCTGCAGCTTAGACTTCAAAGAT
GATCTTTTCAAAGTAACCCACACAGAACCCTTCTCTTTGCTTTTCTCAAACATGCTCGTGAGTTCATTCAGAAACGGATCCAACTG
TAGTAAAACCATTGTTGAAAAACCTCAGATGGATACTCTTTGCAGATGCTCAAGCACTGAAAGGACTTCTTCTTCTTCTTATCTTT
CGGATCACGGAGACTAGAGAAGCTGATGTGATCTGCTCTCCAACACCCACCGGCCGGATGAAATTTATTCGGTAGCTGTAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850396 uncharacterized protein [Arabidopsis thaliana]9056e-095
XP_002880056 hypothetical protein ARALYDRAFT_483474 [Arabidopsis lyrata subsp. lyrata]9021e-094
AAB64043 unknown protein [Arabidopsis thaliana]7067e-072
XP_002876515 glycine-rich protein [Arabidopsis lyrata subsp. lyrata]5973e-059
NP_191523 glycine-rich protein [Arabidopsis thaliana]5831e-057

Swiss-Prot top hits (Blast detail)Scoree value
O04421 Signal recognition particle 14 kDa protein5541e-055
O04433 Signal recognition particle 14 kDa protein3855e-036
P37108 Signal recognition particle 14 kDa protein2385e-019
Q4R5C7 Signal recognition particle 14 kDa protein2385e-019
Q5RBX7 Signal recognition particle 14 kDa protein2385e-019

TrEMBL top hits (Blast detail)Scoree value
Q8VYY8 Putative uncharacterized protein At2g436309054e-095
O22840 Putative uncharacterized protein At2g436307065e-072
Q9M1A4 Putative uncharacterized protein At3g596405838e-058
B9DGY4 AT2G43640 protein5542e-054
C6TI88 Putative uncharacterized protein5067e-049

Arabidopsis top hits (Blast detail)Scoree value
AT2G43630.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast, nucleus, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G59640.2); Has 48 Blast hits to 48 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 0; Plants - 32; Viruses - 2; Other Eukaryotes - 2 (source: NCBI BLink).9052e-097
AT3G59640.1 glycine-rich protein5834e-060
AT3G59640.2 glycine-rich protein5834e-060
AT2G43640.1 signal recognition particle 14 kDa family protein / SRP14 family protein5558e-057
AT2G43640.2 signal recognition particle 14 kDa family protein / SRP14 family protein5558e-057

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  20%
 
85  33%
 
125  33%
 
102  13%

Unigene MembersMember information