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Information for unigene UN19677

FASTA Sequence
Unigene ID: UN19677Length: 868  SNP
GGGTCTAGCGGCAGCCGTGTGTTCAGGTTGAGGAGAGACGCCATGGGAAGAAGACCGGCAAGGTGTTACCGTCAGATCAAGGGCAA
GCCATACCCTAAATCCCGCTACTGCCGCGGTGTCCCCGATCCCAAAATCAGGATCTACGATGTCGGCATGAAGAGGAAAGGCGTCG
ACGAGTTCCCTTTCTGCGTCCACTTGGTCTCGTGGGAGAAGGAGAACGTCTCCAGCGAAGCCCTCGAGGCCGCGCGTATCGCTTGC
AACAAGTACATGGTGAAGTCCGCCGGGAAAGACGCTTTCCACCTGAGGATTAGGGTTCACCCGTTCCATGTCCTGAGGATCAACAA
GATGCTTTCGTGCGCTGGAGCCGATAGGCTTCAGACCGGTATGAGAGGCGCTTTCGGGAAGGCCTTGGGGACTTGTGCTAGGGTTG
CGATCGGGCAGGTGCTTTTGTCTGTGAGGTGTAAGGATGCTCATGGTCATCATGCTCAGGAGGCTCTCAGGAGGGCTAAGTTTAAG
TTCCCTGGTCGTCAAAAGATTATCGTCAGCAGGAAATGGGGTTTCACGAAGTTTAACAGAGCAGACTTCACGAAGTTGAGGCAAGA
GAAGCGTGTTGTTCCTGATGGTGTTAATGCTAAGTTCCTGTCATGCCATGGGCCTTTGGCTAACCGTCAGCCCGGAAGTGCATTTT
TGCCAGCCACCTATTGAAGTTTCAGAGCTCTTGTCTACTCTCTTTTCCTCCTGTGAAAGATTATTAGTCAGTCTGAAACTTGTCTT
TGAAAGTACTTGTCTTAAAAAGTTTTTAGTTGGACCTCATTCAGTATCCCGAACCTTTTTGATATGATATTGTTCTTTTCTATGCT
GGCCAACA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563945 60S ribosomal protein L10-1 [Arabidopsis thaliana]11704e-126
CAA78856 Wilm's tumor suppressor homologue [Arabidopsis thaliana]11623e-125
NP_174013 60S ribosomal protein L10-2 [Arabidopsis thaliana]11509e-124
XP_002893373 60S ribosomal protein L10 [Arabidopsis lyrata subsp. lyrata]11463e-123
NP_564878 60S ribosomal protein L10-3 [Arabidopsis thaliana]11104e-119

Swiss-Prot top hits (Blast detail)Scoree value
Q93VT9 60S ribosomal protein L10-111702e-127
Q08770 60S ribosomal protein L10-211504e-125
Q93W22 60S ribosomal protein L10-311102e-120
Q9SPB3 60S ribosomal protein L1010448e-113
P93847 60S ribosomal protein L1010285e-111

TrEMBL top hits (Blast detail)Scoree value
Q2HIH6 At1g2691011506e-124
A9P8W6 Predicted protein10574e-113
B9SED8 60S ribosomal protein L10, putative10574e-113
C6SVF4 Putative uncharacterized protein10521e-112
A9PGG5 Predicted protein10512e-112

Arabidopsis top hits (Blast detail)Scoree value
AT1G14320.1 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome11711e-128
AT1G26910.1 60S ribosomal protein L10 (RPL10B)11504e-126
AT1G66580.1 60S ribosomal protein L10 (RPL10C)11102e-121
AT1G14320.2 SAC52 (SUPPRESSOR OF ACAULIS 52); structural constituent of ribosome4613e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  22%
 
62  22%
 
122  22%
 
112  22%
 
81  11%

Unigene MembersMember information