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Information for unigene UN19678

FASTA Sequence
Unigene ID: UN19678Length: 1407  SNP
GGGGCTAGTCAACAATGTCGACCAAACTTTTCTAATTCTAGAAAGTAACACAAAGCTTCTTCCTCTTCTTTATTCTTTTTTCATAT
AAATGCATTACTATTTTTGACCACTCCACGTTCTTGGTGGAGCGCGCATTACACACTGCGTCAGAATCGAATCTCACGCGTCTTTT
CTTTAGCTTTTAGTTCTTCGAGCCCACAAGAATCCCATATCCGATTCGTGGGTCCATCCTTACAGATGTGGTCGGTGGTGGGTGGT
TTGAGGCGTACGGCGTTTTCCGCCGTGAGTAAAGGTTCTCCGACAAGGTCATTGCTCGGCGGTGGTTACAGATGTCTGACCGTCGA
ACCAACAACGGAGAAGGGGGAGGAGATAACTGTAACGGAAGCGAAGAAGCTAATGAGGTTAGTGAATGTTGATGAGATGAAGAAGA
AGCTCGGTTGTATGGGGAATGAAGAAACTGTCTCTTACACTAAACTCATTGAAGCATCTCAAGGTTTAGGTATCGCTAGATCTCTC
CACGAAGCTCACGCCTTCGCTCGTATTCTCGATGATGCTGGTGTGATTTTAATTTTCCGTGATAAAGTCTATCTTCATCCTCATAA
GGTGGTGGAGTTGATTAGAAAGGCAGTGCCTTTAGGTTTAAATCTAGAGGATGATCCAGCTAAAGTCGAGTTCGATAAGCTTAGGA
GAATGAAGGAAGAGATTGATGTGTTAGCACATAAGCAAGTGAGGAAGATTCTGTGGTGTGGTCTTGGTTACTCTGTGGTTCAGATC
GGTCTGTTTTTCAGGCTAACTTTCTGGGAGTTTTCATGGGATGTGATGGAACCCATTACGTTTTTCACTACAGCGACTGGGATTAT
TGTTGGTTATGCTTATTTCTTGATGACTTCGAGGGACCCAACTTATCAAGATTTCATGAAGAGGTTGTTTCTTTCTAGGCAGAGGA
AGTTGCTCAAGAGTCGCAACTTCGATGTTGAGAGGTTTAAGGAACTTGAGAAGAAGTCGTCTTGCTCTTCTTCTTCTTCCCATCAC
TCGTGCCACGCCAACGCATCGATTCGGAAATGTGTTGGGGTTGATCTTGATTTAGAGGATTCTTTGCATAGTCGCAGGGACTGATT
CACTCGGTTTCTGGTTTTCTAACCATTATTCACTTTTGATTCTATATACTTGAACCAATGTTACTGGAGGTTCTTCTTCATGTTTA
ATTCTTTTGGTGTTCGCAGAAAAAGGATCCAAATGATGTTTTACTTTTGCAAGTAGTCAATCGAGATGGATAAAGAAACTTAGGGG
GGTGTATTCAACCGAGAGTTTCAGATGATTTGTATTAAAACGATAAATTCAATGTTATTCAAACATGAATTTTAAAAACCTATTTA
AAATCTACTGTTATTGAACTTGACATTTCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_176074 uncharacterized protein [Arabidopsis thaliana]11171e-119
AAG50752 hypothetical protein [Arabidopsis thaliana]10937e-117
XP_002894678 hypothetical protein ARALYDRAFT_474846 [Arabidopsis lyrata subsp. lyrata]10902e-116
NP_563846 uncharacterized protein [Arabidopsis thaliana]9881e-104
XP_002892511 predicted protein [Arabidopsis lyrata subsp. lyrata]9817e-104

Swiss-Prot top hits (Blast detail)Scoree value
Q8NE86 Coiled-coil domain-containing protein 109A2251e-017
Q3UMR5 Coiled-coil domain-containing protein 109A2251e-017
Q08BI9 Coiled-coil domain-containing protein 109A2223e-017
Q810S1 Coiled-coil domain-containing protein 109B2053e-015

TrEMBL top hits (Blast detail)Scoree value
Q8VYR0 Putative uncharacterized protein At1g5761011178e-120
Q9FVU1 Putative uncharacterized protein T8L23.810935e-117
O80539 F14J9.24 protein8481e-088
B9SK68 Putative uncharacterized protein8005e-083
A8MR98 Uncharacterized protein At1g57610.37971e-082

Arabidopsis top hits (Blast detail)Scoree value
AT1G57610.1 unknown protein11175e-122
AT1G57610.2 unknown protein11175e-122
AT1G09575.1 unknown protein10092e-109
AT1G57610.3 unknown protein7976e-085
AT2G23790.1 unknown protein4141e-040

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  33%
 
82  22%
 
112  22%
 
92  22%

Unigene MembersMember information