 |
Information for unigene UN19689
| FASTA Sequence |
| Unigene ID: UN19689 | Length: 1816 |
| SNP | AGGGGAACACAAACACATACATTTACTTATTAACCATGAAGCTTCATGGACTAGCCTTGATAGGTTTTCTATTTGCTGCGGCAAGT
TGCAAAGCTATTGAGGACATTAATTGTCAAGAGAACGAGCCATTCACATGTGGAAACACTGATCAGTTAAGCAGTAAAAGTTTCCC
AAAAGACTTTATCTTCGGTGTTGCTTCTGCTGCTTACCAGGTGGAAGGGGGCAGAGGACGTGGTCTTAACGTTTGGGATGGCTTCA
CTCACCGATACCCAGAGAAGGGAGGATCCGATCTTGGGAATGGAGACACTACTTGTGAGTCATATACGAGATGGCAGAAAGATATA
GACATCATGGACGAACTCAATGCTACTGGCTACAGATTCTCATTTGCCTGGTCAAGAATCATTCCAAAAGGAAAGGTGAGTAGGGG
AGTGAACAAAGGAGGTCTCGAATACTACCACAAACTCATAGATGGCCTCATCGCAAAGAATGTAACCCCTTTTGTTACCCTCTTCC
ACTGGGACCTTCCTCAAACGCTCCAAGATGAGTATGAAGGTTTCTTGAACCGCACCATCATAGATGACTTTAGAGATTATGCGGAT
CTATGTTTCAAGGAATTTGGTGGAAAGGTGAAGAACTGGATCACGATCAACCAGCTGTACACAGTGCCTACGAGAGGCTATGCAAT
CGGAACAGATGCACCTGGTCGATGCTCTCCGGAGGTTGATGACAGATGTTACGGCGGAAATTCTTCAACAGAACCTTATATAGTTG
CACATAACCAGCTTCTTGCTCATGCTGCGGCGGTCGATGTTTACAGGACAAAATATAAGTTTCAAAGAGGGAAGATCGGACCAGTG
ATGATAACTAGATGGTTTCTTCCATTTGATGCCACTGACAAAGCCAGCAAAGATGCAGCTGATAGGATGAAAGAATTCTTCTTGGG
ATGGTTCATGGAGCCGCTAACAAAGGGTAGATACCCAGACATCATGAGACAAATTGTGGGTAGTCGGCTTCCCAATTTCACGGAAG
CAGAAGCGGAACTCGTTGCGGGTTCATATGATTTTCTTGGTCTCAATTACTACACCACTCAGTACGCCCAGCAAAAACCTAACCCA
GTTACATGGGCAAATCACACTGCCATGATGGACCCAGGCGTAAAGCTCACATATAACAATTCACGTGGTGAAAATCTTGGTCCACT
GTTCGTAAAAGACGCAAAAAACGGCAATGCCTATTACTACCCAAAAGGCATTTATTACGTTATGGACTACTTCAAAACCAAATACA
ATAACCCTTTGATCTATATCACTGAGAACGGATTCAGTACTCCCGGTGAAGAAACCCGTGAGGAAGCTATTGCCGATTCCAAGCGG
ATCGATTATCTCTGCAGTCATCTATGTTTTCTCCGTAAGGTCATCAGGGAGAAGGGTGTCAACATAAAAGGATACTTTGCATGGGC
CCTTGGAGACAATTATGAATTCTGCAAAGGTTTTACCGTTAGATTCGGACTTAGTTACGTTAACTGGACAAACCTCGATGATAGAA
ATCTCAAAGAATCTGGCAAATGGTACCAAAGCTTTATTAACGGTACTACAAAGAACCCTGCCAAACAAGATTTCCGCCGCCCAAAC
CTCTCATTCCAGAACCAGAAGAAGAAGCTCGCAGATGCATGAAACACTTTTTCCCACCATCATGATCATCTTCATATCTCTACTAC
TTGCGTCATAGATAAGGAGCTTGTTCTATCTATATTGTACTAAATAAGTATTCCAATAAAAGATGATCATTTACTAATGAATAGTT
TCGTTTGAGT
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABS30827 myrosinase [Brassica oleracea] | 2720 | 2e-305 |
| ABG77972 myrosinase [Brassica oleracea var. alboglabra] | 2511 | 4e-281 |
| AAV80206 myrosinase [Brassica rapa subsp. pekinensis] | 2510 | 5e-281 |
| ADP24127 myrosinase 2 [Brassica napus] | 2508 | 9e-281 |
| Q00326 RecName: Full=Myrosinase; AltName: Full=Sinigrinase; AltName: Full=Thioglucosidase; Flags: Precursor | 2507 | 1e-280 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A7LCK9 Myrosinase | 2720 | 2e-305 |
| A6XG32 Myrosinase | 2511 | 3e-281 |
| Q5DNB0 Myrosinase (Fragment) | 2510 | 3e-281 |
| Q5DNA9 Myrosinase (Fragment) | 2501 | 4e-280 |
| Q56H06 Myrosinase (Fragment) | 2496 | 1e-279 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G26000.1 TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | 2070 | 2e-232 |
| AT5G25980.2 TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | 1993 | 2e-223 |
| AT5G26000.2 TGG1 (THIOGLUCOSIDE GLUCOHYDROLASE 1); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | 1779 | 1e-198 |
| AT5G25980.1 TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | 1722 | 4e-192 |
| AT5G25980.3 TGG2 (GLUCOSIDE GLUCOHYDROLASE 2); hydrolase, hydrolyzing O-glycosyl compounds / thioglucosidase | 1722 | 4e-192 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
