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Information for unigene UN19697
| FASTA Sequence |
| Unigene ID: UN19697 | Length: 942 |
| SNP | GAACATTCACAGTGAAAAATCACATTTTAAAATAACGATCGATTCTCTACATCAAAGCACAAAACACACACACATTTTACACAATG
CATTATCATAGTGATTACAAAAACCAAAGCAGAGCCTGATGAATTTCCCAAGAAGGGAAAGGTGAGAAAGAGAATGTAAAGTCTTA
CTTGAAACAAGAAGGAAGACTTGGCCCGTGGCAAACAAAGGCCATCGCGACGTATACAACCACTGCGAGTATAAGTATCAGTGCAA
TCGTAAGCTTAACATTTCTCCACCACATGACGCTTCGAAAACGGCGAGCTTGCTTCCTGAAACGAAAAGTGTTCCCTTGCATGTTT
GCGGTTTTATCCACAAGCAACTCCAAACGCTCCCCTCTATCCAAGACTTTATCTATATTCTCAATCATCACGTTTCTAACCTGAGA
CATTTCAACTTTGATTCTGCTAACCCTGTCAGCATTGGGATCGTTGGAATAGTATTCCATGCCTTGACTCAAAACCCTTGAAAACT
CATCGTTCATGGAGTAAGCCTGAGCAGAGTGAATGGCACGGCCGTAACTTCTCACAAATCTCTGATGAATCTCTTCCAGAAACCCA
AACGGAATACTCCTTCCGGCGGTTTCATCGGCCATACAGAGGGCGGTAAGACCATCGGTACGCTTGACGTGGAAGACGTACCGATC
CTGAGAGTAGGACACGTGGCTATCCACGTCTTCACCCGGCAGCTTCTCCAAAATCTGCTTCGCGATTGAGCTCGCGTTGGTTGAAG
TTGCGCTAAACTCCGATAACACCACCGATCCACGCGCCACCAACGCATATAAGATCGCCATCTATCTACTCCGACTCGCAAAATCA
AAGAGTATCTCCCGTCCGGTCCGTCCTTGGCTATTAACAATGATTTAAAAGTCTTATCTGAAAGCCCGCTTGCTTACTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_196676 vesicle-associated membrane protein 713 [Arabidopsis thaliana] | 1028 | 1e-109 |
| XP_002873497 ATVAMP713 [Arabidopsis lyrata subsp. lyrata] | 1024 | 4e-109 |
| XP_002515492 Vesicle-associated membrane protein, putative [Ricinus communis] | 966 | 2e-102 |
| XP_002867255 vesicle-associated membrane protein 7C [Arabidopsis lyrata subsp. lyrata] | 953 | 7e-101 |
| XP_002285207 PREDICTED: hypothetical protein [Vitis vinifera] | 952 | 9e-101 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LFP1 Vesicle-associated membrane protein 713 | 1028 | 6e-111 |
| O49377 Vesicle-associated membrane protein 711 | 945 | 3e-101 |
| Q9SIQ9 Vesicle-associated membrane protein 712 | 927 | 3e-099 |
| Q9FMR5 Vesicle-associated membrane protein 714 | 667 | 4e-069 |
| Q86AQ7 Vesicle-associated membrane protein 7B | 463 | 2e-045 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RP23 Vesicle-associated membrane protein, putative | 966 | 1e-102 |
| A9P9E7 Predicted protein | 945 | 4e-100 |
| Q0WWE7 Vesicle-associated membrane protein 7C | 940 | 2e-099 |
| A9PGC9 Predicted protein | 924 | 1e-097 |
| B8B3G1 Putative uncharacterized protein | 858 | 5e-090 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G11150.1 ATVAMP713 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 713) | 1029 | 4e-112 |
| AT4G32150.1 ATVAMP711 (ARABIDOPSIS THALIANA VESICLE-ASSOCIATED MEMBRANE PROTEIN 711) | 945 | 2e-102 |
| AT2G25340.1 ATVAMP712 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 712) | 927 | 3e-100 |
| AT5G22360.1 ATVAMP714 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 714) | 667 | 4e-070 |
| AT1G04750.1 VAMP721 (VESICLE-ASSOCIATED MEMBRANE PROTEIN 721) | 399 | 5e-039 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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