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Information for unigene UN19698

FASTA Sequence
Unigene ID: UN19698Length: 686  SNP
CGAAATGTAAACAGAGTCTCAAATTAACTGAAGATATATTTTTTCAAATCCATTGAGAAAGAGAGTTCTCCGAAGATAAAACCACA
AAGTAAAAGACATTATTAAGGTCGACCAATCAGAAGAAAAGAAGCTAAAGGGGAAAACGAATATACAATCAAACTATCAAATCAGA
GCATATTAGCAGGAAGATCCAAACGTGTTCTCTCCACTGTATGTCATGTAGAGAAACCCATCTTCGTCTTTGTGTTCTTCATAGAT
TGCAGACATCAATGCAGCAGTTGGGGGTAACGTGTTCTTGACAAAGACAAAGATTGCTTTCTCGGCTCCGAGCTTAATTCTTTTGC
GCACAACGTACACAAATTGTCCAGCGGTTAGATCAGCTGGCACAAGATACTTCTTCTTGTCAATGTCAGGAACATCACTTTGTGCA
GCTTTCTCCACAATCACAGGAACTCTGTCTTGGTACTTGTCTCTGATACGAGTAGATTCAGCCATTCTCACCTCCAGAGGATTAGA
AAGCTTGAAGGAGTTTTTGGCCATGTCGATTCGATCAGTATCTAAAGAAGAAGAAGCGATTCGATGATCGAGAGAAACTAGGGTTC
GGTGATCAAAGCCTGAGAAAAAATTGAAGGAAGAGAATATTTAAAGATGTATTTAGGGTTTAGTGATTGTTTCCTACACGGCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874805 hypothetical protein ARALYDRAFT_911720 [Arabidopsis lyrata subsp. lyrata]5799e-058
NP_001078424 autophagy-related protein 8a [Arabidopsis thaliana]5753e-057
XP_002869850 predicted protein [Arabidopsis lyrata subsp. lyrata]5701e-056
NP_192371 autophagy-related protein 8b [Arabidopsis thaliana]5628e-056
NP_567642 autophagy-related protein 8a [Arabidopsis thaliana]5601e-055

Swiss-Prot top hits (Blast detail)Scoree value
Q9XEB5 Autophagy-related protein 8b5624e-057
Q8LEM4 Autophagy-related protein 8a5607e-057
A2YS06 Autophagy-related protein 8C5177e-052
Q6Z1D5 Autophagy-related protein 8C5177e-052
Q2XPP5 Autophagy-related protein 8A5113e-051

TrEMBL top hits (Blast detail)Scoree value
A8MS84 Uncharacterized protein At4g21980.25752e-057
B9RXK4 Gaba(A) receptor-associated protein, putative5241e-051
Q6W5F3 Microtubule-associated protein 1 light chain 35204e-051
B7E7M3 Putative uncharacterized protein5171e-050
B9SV86 Gaba(A) receptor-associated protein, putative5171e-050

Arabidopsis top hits (Blast detail)Scoree value
AT4G21980.2 APG8A (AUTOPHAGY 8A); APG8 activating enzyme/ APG8-specific protease/ Atg8 ligase5751e-059
AT4G04620.1 ATG8B (autophagy 8b); microtubule binding5624e-058
AT4G04620.2 ATG8B (autophagy 8b); microtubule binding5624e-058
AT4G21980.1 APG8A (AUTOPHAGY 8A); APG8 activating enzyme/ APG8-specific protease/ Atg8 ligase5606e-058
AT1G62040.1 ATG8C (autophagy 8c); microtubule binding5033e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
96  38%
 
84  25%
 
124  25%
 
201  6%
 
181  6%

Unigene MembersMember information