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Information for unigene UN19711
| FASTA Sequence |
| Unigene ID: UN19711 | Length: 1456 |
SSR | | AGAAATTTAATAGTGAGATTTGTGAAATCATTATTAAGTTAACAATAAACAAAATATAATTTGGTTTTGTCTTCCCACCTCGGAAA
TTACATAACAGAATACAGATAATTTTGAGAAATACATACACAACTCTTCAAAAGTGGGACTTAAATACAAAACCAAAATGAATACA
CATTTGATTAATCATTGTGAAGCAGCAGCTGAAATGTGGTTTGGAGACCTGATGATCAGTAAGGGTTTCTATGTGGAGTAGAACGA
GGATGGTTTAAAAGAGGTTGAAGTGCCTTCACCACAATGCTCATGTTTGGTCTAAAGTTTGCCTCATACTGCACGCACAGGGCAGC
CACCGCAGCTAGCTTGGCAACAGCTTTGGAAGGGTACTCTCCGAGTAATCTTGCATCAACACATAGCTTCACCTTGTCTTCGCTCA
GTTTAGGGGTTGCCCATGTCACTAGACTTTGTTGTCCACGAGGTAAGGTATGGTCGACTGGTTTACGACCAGTAAGGAGCTCCAAC
AGAACAACGCCAAAACTGTACACGTCGCTCTTTGTGCTCAATGTTCCAGTCATTGCATACTCAGGAGCGTGATAGCCAAAGGTTCC
TAGGACACGAGTTGAGTGAAGCCGAGCAGCCATGTCAGGCGCTTGATTAGAGAGATCGAAATCACCAATCTTGGCAACATCATCAT
CAAACAGAAGGACGTTGCTGGATTTGATGTCTCGGTGGATAACCTGAGGGTTGACCTTCTCGTGCAAGTACTCGAGTCCTCTGGCT
GCACCAACAGCGATTTTGACTCTCTGTTGCCACGTCATAACAGGACCCCGCAGCGCTCCTTTCACACCTTTTCGGCCATGAAGAAC
ATCATGAAGAGATCCGTTGGGAGCATACTCATAAGCAAGAACACGGAGAGGGCCATCAACACAATAACCCACAAGTGCAATAACAT
TCTCGTGTCGCAATCTCGAAACCATTGATATCTGGGAAAGAAATTCTTGGTCAGGCTGCTTGCTAGAGTCAAGTTTCTTAATTGCA
GATGTTACACCGCTTTTAAGAACACCGTGAAACACCCTTCCATAAGAACCCTCACCGACCAAGGCCTTGGAACCATAGTTATCGGT
TACATCACTCAGCTCATCAGCAGGAATGGCTGGTACAGCAATAGGCTCCATCTGAAGAACAGGCTGATTCATGGGTGGATCAGATC
TTAGATAGTGGCTTCCACTGTCACCTGCAGGGATGAGGGTTGGCATTGGTCTAGTATCATCAGCATTACGGAAACCATCATCGTTC
CCACACCAACCGAAACAGCTCATGATTACAACAACTAACTCTTCTATTACACGACAAGTTAACTGTTTGGCGACGAAGTTGGGAAA
GTAGAGAGAGAGAGAGAGATATATTTTTGAAATTGCTATATCTCTGCTTAGTGTTTAAGCTTTGGTAAATGGTTCGACCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175255 serine/threonine protein kinase [Arabidopsis thaliana] | 1658 | 2e-182 |
| AAK96869 similar to Pto kinase interactor 1 gb|AAC61805.1 [Arabidopsis thaliana] | 1652 | 1e-181 |
| NP_188367 putative serine/threonine protein kinase [Arabidopsis thaliana] | 1587 | 4e-174 |
| XP_002883060 hypothetical protein ARALYDRAFT_479217 [Arabidopsis lyrata subsp. lyrata] | 1572 | 2e-172 |
| AAF79541 F21D18.6 [Arabidopsis thaliana] | 1571 | 3e-172 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41328 Pto-interacting protein 1 | 1390 | 1e-152 |
| O80719 Probable receptor-like protein kinase At2g47060 | 1354 | 2e-148 |
| P93749 Probable protein kinase At2g41970 | 1122 | 1e-121 |
| Q3EDL4 Probable serine/threonine-protein kinase At1g01540 | 588 | 1e-059 |
| Q8L4H4 Nodulation receptor kinase | 543 | 2e-054 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93Y19 Similar to Pto kinase interactor 1 | 1652 | 8e-182 |
| Q9LUT0 Putative uncharacterized protein At3g17410 | 1587 | 3e-174 |
| Q9LNH4 F21D18.6 | 1571 | 2e-172 |
| B9RN61 Serine/threonine-protein kinase PBS1, putative | 1393 | 9e-152 |
| B2CZJ8 Pto kinase interactor 1 | 1389 | 2e-151 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G48210.1 serine/threonine protein kinase, putative | 1659 | 7e-185 |
| AT1G48210.2 serine/threonine protein kinase, putative | 1659 | 7e-185 |
| AT3G17410.1 serine/threonine protein kinase, putative | 1588 | 1e-176 |
| AT1G48220.1 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 1412 | 3e-156 |
| AT2G47060.1 serine/threonine protein kinase, putative | 1354 | 2e-149 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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