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Information for unigene UN19718

FASTA Sequence
Unigene ID: UN19718Length: 1288 SSR 
AACAGATCCACAAAACTTTTAAAGGCAACAGAGCAAATCTAGAGAGAGAGAGAGAGAGAGATGGTGACGAAGACGGAGGAGAGAGA
GCTAAACGAACTCGAGAACCAAGTGGAGAACGGAGGCGGAGGCGTTTGGGAGTATCTCTGCCTCGTTCGTAAGCTCAAGGTTCGCC
GATCAGAGATGGTGCTCAAGCACGGTCTCTCGATCCTGAACGATCCGGGGAAGCGATCCGCTCTTGGTCCAGATGAATGGACGCTA
TATGAGCAGGTAGCAATTGCAGCTATGGATTGTCAATCTCTTGCTGTTTCACAGAATTGCATCAAGGTTCTCCAGAAGAAGTTTCC
GGAGAGCAAACGTGTGGGAAAGCTGGAGGCGTTGCTTATAGAAGCGAAGGGAATGTGGGAAGAGGCTGAAAAAGCCTACTCAATCC
TTTTGGAGGATAATCCACTCGATCAAGTGATACACAAAAGAAAGGTGGCTATGGCCAAGGCACAGGGAAAACCTTCCCTAGCCATT
GAACATCTTAACAAATATCTTGAAGTATTCATGGCTGATCATGATGCGTGGAGAGAACTTGCAGAAATTTATGTTTCCTTGCAAAT
GTACAAACAAGCAGCTTTCTGCTACGAGGAGCTCATTTTATCTCAGCCTACTCTTCCATTGTACCACTTAGCATACGCTGATATTC
TCTATACGATTGGTGGACTTGAAAATCTCATCGCAGCAAGAAAGTACTATGCAGCAACCATAGACTTAACAGGTGGTAAAAGCACA
AGAGCCCTCTTCGGAATATGCTTGTGTGGATCAGCAATCGCACAGCTCTCAAGAGGCAGGAACAAAGAGGACAAGGACATGGCTGC
ACCAGGGCTTCAGTCTCTAGCTGCAACTGCATTGGAGAAAGAGTACAAGCAAAAATCTCCGGCCAAACTCAACCTCCTCACGTCTG
CGTTAAGAAGCTTGAAAATGTCTTAAGTTCATCAGAGACCACAAGAGTAAAGTCAACGCAGGCTCACATTTCTTGGTTTTAAGTTT
TTGCGTCTCTGTTCACCCTCACTATAATGTTCTTTCATTTTAGCTCTTGGTTTATTAGATACATCGACTCACAGCTACACGGTTTA
CTAGAGGTGTTACAATCAAAGCTAGTTACATTTTACTCAAGGCTAACAAAAGAAACAAAACAAAAAAATAACACAGCAAAGAATAA
TTTTTTTTTGTAATCATGTATTTAGTCTACAAATTATATATTAACAGCTATATTTATTTACTCATTTATCGAACACAAGTTACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882376 binding protein [Arabidopsis lyrata subsp. lyrata]14503e-158
NP_850995 prenylyltransferase-like protein [Arabidopsis thaliana]14468e-158
NP_566239 prenylyltransferase-like protein [Arabidopsis thaliana]13884e-151
NP_198174 O-linked GlcNAc transferase-like protein [Arabidopsis thaliana]12747e-138
XP_002874419 hypothetical protein ARALYDRAFT_489645 [Arabidopsis lyrata subsp. lyrata]12721e-137

Swiss-Prot top hits (Blast detail)Scoree value
Q6TGY8 Tetratricopeptide repeat protein 354705e-046
Q6INS3 Tetratricopeptide repeat protein 35-A4607e-045
Q8AVU9 Tetratricopeptide repeat protein 35-B4543e-044
Q5M7J9 Tetratricopeptide repeat protein 354535e-044
Q5R882 Tetratricopeptide repeat protein 354482e-043

TrEMBL top hits (Blast detail)Scoree value
Q9CAU9 Contains similarity to O-linked GlcNAc transferases14465e-158
Q93WC8 Putative uncharacterized protein At3g0483013883e-151
Q9S9L2 At5g2822012602e-136
B9MZF5 Predicted protein12432e-134
B9I5D8 Predicted protein12216e-132

Arabidopsis top hits (Blast detail)Scoree value
AT3G04830.1 binding14472e-160
AT3G04830.2 binding14087e-156
AT5G28220.1 binding12743e-140

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  50%
 
81  25%
 
111  25%

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