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Information for unigene UN19723
| FASTA Sequence |
| Unigene ID: UN19723 | Length: 2267 |
| SNP | GTCATGAATGAGATGTACAGATATATGGGTCCGGACAAAGACCTTCCGTCAGAAGAGGTTGGTGTTGGTACTCGGGAAATGGGATA
TCTTTTCGGACAGTACAGACGGCTTGCTGGTCAGTTTCAGGGAAGTTTTACAGGACCACGGATATATTGGGCTGCTTCTAGCCTCA
GAACTGAAGCTAGTGGCTATGGCGTGGTGTACTTTGCACGACTAATGCTTGCAGATATGAATAAAGAAATAAAGGGATTAAGATGT
GTTGTGAGTGGTTGCGGGAAGATAGCGATGCATGTTGTAGAGAAGCTAATTGCCAGTGGGGCTCACCCTGTTACAGTTTCAGATTC
AAAAGGATATTTGGTGGATGACGATGGATTTGATTATATGAAACTTGCCTTCTTGAGAGATATAAAATCCCAACAGAGAAGTCTGA
GAGACTATTCAAAGACGTATGCAAGGGCGAAGTACTTTGATGAAGTAAAGCCGTGGAATGAAAGGTGTGATGTGGCGTTCCCCTGT
GCTTCTCAGAATGAAGTTGATCAAGCAGATGCTATTAATCTGGTCAATGCAGGCTGTCGCTTACTGGTAGAAGGTTCAAACATGCC
GTGTACAGCTGAAGCAGTTGATGTTTTCAGAAAGGCGAATGTTCTGATTGCTCCTGCCATTGCTGCTGGAGCTGGAGGAGTTGCTG
CCGGAGAAATTGAAGAACTCCGTGAATCTAATTCAATGCAATGGTCAGCAGAAGATTTTGAGTCTAGATTACAGGAAGCACTGAAG
CAGACTTATGAGAAAGCTCTCAAAGCAGCTAATGATTTCGGTTATCAGAAAGAGAGTCCTGAGGCTCTTCTACACGGAGCAACAAT
TGCAGCATTTTTGAATATAGCTCAAGCTATGACGGACCAAGGTTGTGTCTAGCTATAAAATGATCCTGCATCTAAGAGTCCCAGCA
GGGTTTGTCTTAAAAATTAAAATCCAAGCGAAGAAGGCGTATTGTACTCTCTGTGACATGTCATTATTTAGAAACTATATACTTTG
ATAGCATTAATGTTTATTAGCTATATAAACATAGCTTTCCATTGCTTATATGTTCTTTAACTTTATAGGTAATGAATGGAAAACAC
TAATGACCCCTTCTTCAACAAGGGGTTGTAAACAAGATTTAATTAATTGTCTTTTGAGATTTGATCATAAACAAAAGAAGTTACGA
ACTCGGCGACATTCTCTTATAATTTGTTCTTATAAACGAACAGAAGGTGAAGGTGATTATATAAGACAAAAGACAAATGTAAATCT
CCAGTACTCTTGAGCAGATCAAAGCTGGGAAAACTGTGGATGTGGAGACTGAATGCTACTCAATGTAAGGCCAGTCTCTTGCATCC
TGATCTCTATCCAGAAAAGAGCTTTAAAACTCGGTATAATAAGGCTCCTCCCTAGCTTCAGGCCCTTGATGTGGGAGCAGAAGCAT
CAGATTTCTCAGCCAAATAGTGCTCAAGCATGTCTTCTTCATCATCTTCAAAGTCATCGTCTTCAAAGTCAATGTCTTCATCATCT
TCCTCCTCAGATTCTTGATCAGCAGTGACCACTACTCCTCTCGCTTTGCCACTCTCGAACCACTGTCTTCCTGTAAGCTTCTTCTC
CTTGGGTGCCGTAAGAGCAGACTCTGGCATCAGCTTGGCTCGCTCAAGTGCAAGCTCTGCCTCATATCTCTCTCTCCATGCCACAA
ATGTCTCCAGAGTAACAGGTTCTCCATGAGGAACAATTACCTCATCCTCTTTGGCGGCTTCTTCCTCAGCATAGTCAGCCCCATCA
TCTTGCCCATAATGTTCAGACAACCAGTCCTTTGCTGATGAGACCAATGTATACATCATTGCCATACCAAGATTTTCAGTCGCCTC
TTGTTCAAGCTTCTCTTTTAAGATGGTGAGGTCACCAACATGGATTCCTCGAATACTTTTAACATCCAAGAGAGGTGCCTCATCTG
GGTAATTCTCTGTGTGCGAGAAAATCAAACCAAGCTGAACTGGTGGGATTGATGATGACTCATCTAGATCATCATCCTGAGGAGTG
ACTGTAATCTGAAAGCATCGGTTTGAAGTGTTAAGCCCACTTTCACTAGAATGAATCTCTTTGAAATCATCAGCAAGTATAGATTC
AAGAGCTTCAATCTCCATCTCCTGTTCCTCCTTATACTCCGTCATGATGTCCAAATTTGAAAGCTTCGAGATTTTGTCTGAATATC
CAAACTCCACAGTTAGTCGCCGTGACGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002891654 hypothetical protein ARALYDRAFT_474290 [Arabidopsis lyrata subsp. lyrata] | 1553 | 6e-170 |
| NP_175583 glutamate dehydrogenase (NADP+) [Arabidopsis thaliana] | 1546 | 4e-169 |
| AAG50868 NADP-specific glutatamate dehydrogenase, putative [Arabidopsis thaliana] | 1546 | 4e-169 |
| XP_002515882 glutamate dehydrogenase, putative [Ricinus communis] | 1353 | 1e-146 |
| CAN69269 hypothetical protein VITISV_043645 [Vitis vinifera] | 1342 | 2e-145 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P95544 NAD(P)-specific glutamate dehydrogenase | 627 | 6e-064 |
| P94598 Glutamate dehydrogenase | 620 | 4e-063 |
| P28724 NADP-specific glutamate dehydrogenase | 615 | 1e-062 |
| P43793 NADP-specific glutamate dehydrogenase | 573 | 1e-057 |
| Q9ZKD8 NADP-specific glutamate dehydrogenase | 573 | 1e-057 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C8I0 NADP-specific glutatamate dehydrogenase, putative | 1546 | 3e-169 |
| B9RQ63 Glutamate dehydrogenase, putative | 1353 | 6e-147 |
| A5APE2 Putative uncharacterized protein | 1342 | 1e-145 |
| B9N1A0 Predicted protein | 1284 | 6e-139 |
| C5XN30 Putative uncharacterized protein Sb03g025320 | 1168 | 2e-125 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51720.1 glutamate dehydrogenase, putative | 1547 | 1e-171 |
| AT1G51730.1 RWD domain-containing protein | 1161 | 6e-127 |
| AT5G07440.1 GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase | 121 | 2e-006 |
| AT5G07440.2 GDH2 (GLUTAMATE DEHYDROGENASE 2); ATP binding / glutamate dehydrogenase [NAD(P)+]/ glutamate dehydrogenase/ oxidoreductase | 121 | 2e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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