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Information for unigene UN19741
| FASTA Sequence |
| Unigene ID: UN19741 | Length: 1759 |
SSR | SNP | GGATATCCGTCGTGTTGCGCTTCATCGTAGTTATCGACGCTCTCATTCACCAACGAAGACACTCTGTTTTTTCTTTAAAGACTCTC
TCTCTCTCTGTTCCAGCTATATTGCAGAACTGATTGTCGTTATCATATTATACAGTACAGAACAAGTCACTCCTTTCACCTTCCTC
CCCTCCTTCGCGCGCTCTCTGAACTGAAGTACAAGATTTCCCGATGGCCCATTCAGCAGATTCCTCCGTCAATCCCAGAGATGTTT
GCATCGTGGGTGTTGCACGCACTCCTATGGGTGGCTTTCTCGGATCTCTCTCCTCCTTACCCGCCACAAAGCTTGGATCCGTTGCC
ATCACAGCTGCTCTGAAGAGAGCAAATGTTGACCCGTCTCTGGTCCAAGAAGTTGTGTTTGGGAATGTTCTCAGTGCTAATTTGGG
TCAAGCTCCCGCTCGTCAGGCCGCTTTAGGTGCTGGGATCTCTAACTCTGTTATCTGTACCACTGTCAACAAGGTCTGTGCTTCAG
GCATGAAAGCTGTGATGATTGCTGCTCAGAGTATCCAGCTGGGGATCAATGATGTAGTCGTGGCGGGTGGTATGGAAAGCATGTCT
AATACACCAAAGTATCTTGCAGAAGCAAGGAAAGGATCTAGGTTTGGTCATGATTCTCTAGTAGATGGGATGCTTAGGGATGGACT
GTGGGATGTCTATAACGACTGTGGGATGGGAAGCTGTGCAGAGTTATGCGCTGAGAAGTTTGAGATAACCAGGGAGCAGCAAGATG
ATTACGCTGTTCAGAGCTTTGAGCGTGGTATTGCTGCTCAAGAAGCTGGCGCCTTCACATGGGAGATCGTCCCGGTTGAAGTTTCT
GGAGGAAGGGGTAGGCCATCAACCATTGTTGACAAGGATGAAGGTCTTGGGAAGTTTGATGCTGCAAAACTGAGGAAACTCCGTCC
GAGTTTCAAGGAGAATGGAGGCACAGTTACAGCTGGAAATGCCTCTAGCATAAGTGATGGTGCAGCTGCTATTGTCCTAGTGAGTG
GAGAGAAGGCGCTTCAGCTAGGACTTCAAGTACTTGCAAAAGTTAAAGGTTATGGTGATGCAGCTCAGGAGCCAGAGTTTTTCACT
ACTGCTCCTGCTCTGGCAATACCAAAAGCTATTGCACATGCTGGTTTGGAATCTTCTCAAGTTGATTACTATGAGATCAATGAAGC
ATTTGCAGTTGTAGCACTTGCAAATCAAAAGCTACTTGGGATTAGTCCGGAGAAGGTGAATGTAAATGGAGGAGCCGTCTCCTTAG
GACATCCTCTAGGCTGCAGTGGAGCGCGTATTCTAATCACATTGCTTGGGATACTGAAGAAGAGAAACGGCAAGTACGGTGTGGGA
GGAGTGTGCAACGGAGGAGGAGGTGCTTCTGCTCTTGTTCTTGAAGTCGTTTGATGCATTTATATGAATCCCAGGTTGTTGAACTA
TATAGAGCGTATCTACTATCATTCTACCAACTTGCACTTCAAGTTTGATATTGGTTGGTCTCTCTCAATAAATGAGTGATGATGAT
CTTTGATGTTGTTAAGTTTATTTAGTTATATTATATGAAAACTATGTTTCTGTTTCCGTACTTTGTGACCTCAGTTCTCAGTTATG
AACCAATCGATTTATTTTAGTTAATGAATTTGATCAAATACATTCCTGTAATGTATATGTATGAAAGGTAAAAATAGTTGGACATG
TCTGTAAAGACACAGGTCTCTGCAGACTTGAGCAGCACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAA97003 acetyl-CoA C-acetyltransferase [Arabidopsis thaliana] | 1985 | 4e-220 |
| NP_568694 acetyl-CoA acetyltransferase, cytosolic 1 [Arabidopsis thaliana] | 1960 | 3e-217 |
| XP_002865618 acetoacetyl-CoA thiolase 2, embryo defective 1276 [Arabidopsis lyrata subsp. lyrata] | 1957 | 6e-217 |
| NP_851154 acetyl-CoA acetyltransferase, cytosolic 1 [Arabidopsis thaliana] | 1934 | 3e-214 |
| ADD10719 acetyl-CoA C-acetyltransferase protein [Camellia oleifera] | 1781 | 2e-196 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8S4Y1 Acetyl-CoA acetyltransferase, cytosolic 1 | 1960 | 1e-218 |
| Q9FIK7 Probable acetyl-CoA acetyltransferase, cytosolic 2 | 1659 | 1e-183 |
| Q9UQW6 Acetyl-CoA acetyltransferase | 1176 | 1e-127 |
| Q12598 Acetyl-CoA acetyltransferase IA | 1104 | 2e-119 |
| Q04677 Acetyl-CoA acetyltransferase IB | 1099 | 8e-119 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGQ1 AT5G48230 protein | 1960 | 2e-217 |
| Q43637 Acetoacetyl-coenzyme A thiolase | 1915 | 3e-212 |
| D3YN47 Acetyl-CoA C-acetyltransferase protein | 1781 | 1e-196 |
| A9ZMZ4 Acetyl-CoA C-acetyltransferase | 1775 | 6e-196 |
| B9IAU7 Predicted protein | 1771 | 2e-195 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G48230.2 ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic | 1961 | 8e-220 |
| AT5G48230.1 ACAT2 (ACETOACETYL-COA THIOLASE 2); acetyl-CoA C-acetyltransferase/ catalytic | 1935 | 8e-217 |
| AT5G47720.3 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative | 1660 | 6e-185 |
| AT5G47720.1 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative | 1660 | 6e-185 |
| AT5G47720.2 acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative | 1659 | 8e-185 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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