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Information for unigene UN19752

FASTA Sequence
Unigene ID: UN19752Length: 684  SNP
TTTTTGGGCCCAAATTAATAGAAGACTTTATCTTATAGTTTAGGGATTGGATCATAAAGATCTTTAAATTTTTCTCAAACAAGTGT
CTGAAACAAGTTTAAGTTCAACCAAACTAAACAAGATCTGTCAAAAAAACAATAGAAGTACCAAGATAAATTGTACTGAGCAGCAA
CGAGCAGAAACCAAAACAACAGAAACACGAAACAGAAGTAATAACTCTTCTAGTCTTCTTCCTCACCCTCGTTCTCAGCGATGTTG
AAGTACCTCAACTCGTAGAGGTTACGGTCCTTGTTGGCTGCAATCACTCTGAGCCAATCCCTCACGTTGTGCTTCTTCAAGTACTT
CTTCGTCAAGTACTTGAGATACCTCTTGGAGAACTGACCATCAGAAGTGACAGTGATCTTGTTCTTCTCACGGGTGATTGTGACAG
AGTCACCGAGAGCACCGGCTTTGCCACCGACTTTGATCCTCTCCTGAAGGAACTTCTCGAGGGAAGCAATCTCCATGATCTTGTCA
TCGACAGGCTTGGAGCAGTCGATGGAGAAGGAGACTCCCTTCTTCTTTCCCTTGGCGACTGCTGCACTTCCACGACTCATCTTTCA
AACCCCCTTCTCTCTTGAACAAATCCTAGAAGGTGAGACTGTCTGAATAAACGAGCGGCGTCTTTTAGCTGAGGAGACGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34418 unnamed protein product [Thellungiella halophila]6173e-062
XP_002882425 60S ribosomal protein L22-2 [Arabidopsis lyrata subsp. lyrata]6156e-062
NP_187207 60S ribosomal protein L22-2 [Arabidopsis thaliana]6148e-062
NP_198129 60S ribosomal protein L22-3 [Arabidopsis thaliana]6012e-060
XP_002874346 60S ribosomal protein L22 [Arabidopsis lyrata subsp. lyrata]5942e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9M9W1 60S ribosomal protein L22-26144e-063
Q9FE58 60S ribosomal protein L22-36011e-061
Q9SRX7 Putative 60S ribosomal protein L22-14272e-041
P47198 60S ribosomal protein L223672e-034
Q4R5I3 60S ribosomal protein L223662e-034

TrEMBL top hits (Blast detail)Scoree value
Q0WRH6 60S ribosomal protein L22-like6012e-060
A5CBL0 Putative uncharacterized protein5715e-057
A9PCU0 Putative uncharacterized protein5617e-056
A9PD16 Putative uncharacterized protein5601e-055
C6SVM3 Putative uncharacterized protein5601e-055

Arabidopsis top hits (Blast detail)Scoree value
AT3G05560.1 60S ribosomal protein L22-2 (RPL22B)6153e-064
AT3G05560.2 60S ribosomal protein L22-2 (RPL22B)6153e-064
AT3G05560.3 60S ribosomal protein L22-2 (RPL22B)6153e-064
AT5G27770.1 60S ribosomal protein L22 (RPL22C)6029e-063
AT1G02830.1 60S ribosomal protein L22 (RPL22A)4272e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  9%
 
1011  50%
 
66  27%
 
202  9%
 
121  5%

Unigene MembersMember information