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Information for unigene UN19756

FASTA Sequence
Unigene ID: UN19756Length: 1431 SSR 
GGGGGTCTAAATCTCTCTCTCTCTCACAAGTGTGCCTTGCCTGCCTGACTTTCTCTCTACGAAACAATCTCTCTAACAATGGTTCT
CGAGGCGACAATGATATGCATCGACAACTCGGAGTGGATGCGAAACGGAGATTACTCTCCCTCTAGGTTACAGGCTCAAACCGAAG
CTGTTAATCTTCTTTGTGGTGCCAAAACCCAGTCGAATCCAGAGAACACGGTGGGGATCTTGACCATGGCAGGCAAAGGAGTTAGA
GTTTTGACGACGCCTACCTCTGATCTTGGCAAGATTTTGGCCTGTATGCACGGACTCGATGTTGGAGGAGAGACTAACTTAACTGC
AGCCATCCAGATTGCTCAGCTTTCTCTCAAGCATCGCCAAAACAAGAATCAACGCCAACGTATCATTGTTTTCGCTGGAAGCCCAA
TCAAGTATGAAAAGAAGGCCTTGGAGGTTGTTGGCAAAAGGCTTAAAAAGAACAGTGTCTCTCTTGACATTGTCAATTTTGGTGAT
GATGACGATGTGGACAAGCCTCTCAAACTTGAGGCCCTCCTTTCTGCCGTCAATAACAATGATGGTAGCCACATTGTCCATGTTCC
TTCCGGTGCCAATGCTCTCTCTGATGTCCTCCTCAGCACACCTGTATTCACTGGTGATGAGGGTGCAAGTGGGTATGTTTCTGCGG
CAGCTGCTGCTGCTGCTGGGGGTGGTGACTTTGATTTTGGTGTTGATCCAAATATCGATCCAGAGCTTGCTCTCGCCCTTCGGGTC
TCCATGGAGGAGGAGAGAGCAAGGCAAGAGGCTGCTGCTAAGAAGGCAGCTGATGACGCTGGTCAGAAAGACCATGATGGGGCTTC
AGCTTCTGCCTCGCAGGAGACGGTTGCTAGGACAACTGATAAGAACGCTTAACCAATGGATGAGGACAACGCATTGCTAAATCAGG
CAATTGCTATGTCCGTAGGTGATGTAAACATGTCAGAAGCCGCGGATGAGGACCAGGACTTGGCTTTAGCTCTGCAAATGTCAATG
AGTGGGGAGGAGTCAAGTGAGGCTACGGGTGCTGGAAACCTCCTAGGAAATCAAGCTTTCATATCATCTGTTCTCTCATCGCTTCC
AGGGGTGGATCCAAATGATCCAGCGGTTCAAGCGCTGCTAGCGTTTCTGCCAGACGAATCAAAGCGGAACGAGGAAGAGGGTGGTG
GCAAAGGTGAGGATGAGAAGAAGTGAAGAAAGAGACGGACGTATCCTGATGGCTCTCAATAAAATTCATGTTTTATCTCTTTGGTT
TGGTTTTGTTAGAGAGATCATATTGGGACTGATGAAGAAGAACTCTTGTATTAATCTTTCTGCCTTGTGACCTTGTTCGTTCTCTC
GCTCTTTTGTAACGTTATTAGTTTGTCCAAAAAATATCGGTGGCCTTAGATAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_195575 26S proteasome non-ATPase regulatory subunit 4 [Arabidopsis thaliana]17712e-195
XP_002868850 multiubiquitin chain binding protein MBP1 [Arabidopsis lyrata subsp. lyrata]17684e-195
AAM65985 multiubiquitin chain binding protein MBP1 [Arabidopsis thaliana]17632e-194
NP_001140864 hypothetical protein LOC100272940 [Zea mays]12291e-132
XP_002313718 predicted protein [Populus trichocarpa]11403e-122

Swiss-Prot top hits (Blast detail)Scoree value
P55034 26S proteasome non-ATPase regulatory subunit 417718e-197
P55036 26S proteasome non-ATPase regulatory subunit 47044e-073
Q58DA0 26S proteasome non-ATPase regulatory subunit 46704e-069
Q553E0 26S proteasome non-ATPase regulatory subunit 45503e-055
P38886 26S proteasome regulatory subunit RPN105342e-053

TrEMBL top hits (Blast detail)Scoree value
Q8L9G3 Multiubiquitin chain binding protein MBP117631e-194
B4FRU4 Putative uncharacterized protein12299e-133
B9HR77 Predicted protein11402e-122
B9T6I9 26S proteasome non-atpase regulatory subunit, putative11142e-119
B7FLK5 Putative uncharacterized protein10944e-117

Arabidopsis top hits (Blast detail)Scoree value
AT4G38630.1 RPN10 (REGULATORY PARTICLE NON-ATPASE 10); peptide receptor17725e-198

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  43%
 
82  29%
 
111  14%
 
91  14%

Unigene MembersMember information