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Information for unigene UN19777

FASTA Sequence
Unigene ID: UN19777Length: 1693  SNP
CGGAGAAGATAATACGAAATATCTTTAATTTATATTGTTTCCAAATTCAAGAAGTCTAAAACACGATAAAAAAAGATAACACGAAA
TCAACCCAAAAACAAAACACACTCGCGCACGGAATAAATTAGGTGCATGTTTCACGTGAAATGCCGAGCCTGGAATTGGGAAGGTC
GATGAGAACACGGTGGTTCTGTTGCTGCATGCTAGCAATGACATTGAGGACGGAGTTTACGTTATTCGGAGCTGCGGCCATGGCGA
GACAGCTTGTGCTACCTGAGGAGCTGTGGATGAAAAGATTGTCCGGAGGCAAAGTCACGTTCATTCCCGCGAACATAAACGTGACC
GATGGGAACACGACGGAGCCGGAGTAGCAAGTGTCGAAGCCTCCGAGTGCTGTTGCATTTGCGTTCTTGACCCGTCGCCTGAACTC
ATTTCTCACGGCAACGTAAGCTGGTTCCACTAGCCTCGTGTAGACCGTTCCGGAGTCAAAGATGGTGCCAGCTCCTGTTGCCGGAT
TAAAGGCGAGTGCACTTGGTGGAATATCCACAATTTTATTCCCAACACGAATCCCAACCATGTTAACATAGTAAAGCGATGATCTC
CTTGGGTTCTTTAACAATGGAGTGGTCTTGATCCTAACTGGTTGAAACTTAGGGCCTAATCTTAACGTTCCCGAGAAACTGCTGGA
TTTACTATTAGGCAAGCAATACGAGAATGTGGACTTATAAAGGTTTTGCGTCTGTGAGATTAAAGACAATGGACCACGACCTAAAC
CCATGAGTCCTTGTGCTGGCAACGATGTTCCGGTGGCTTTGTTGATGCACCCAAAAGTGTAGTTTGGGATGGCGTCATCGGTTAAT
GTTAGTGTGTCTTGTGTCAGAGATGCTGTGATGGTTGATCCACCGTAAGTCATATTGAAACCACATGATTTGCTCACGGTGCACGT
TGGATTTGGAGCCTGTTTACACTGAGGAGCTTCGCATTGAACAGTGCGAGAAGAGCTAGACTTGGAAGGGTCAAAGAGAACCGAGG
AAGCACAGCCAAGGCAACCAGAACAAGGAACCCAAGTAACGTCATTGCTAGTGTCAAGAGCCACGAGCATGGGCTGAGCCGGTGTC
CCAATGTTAGCCCTCACGATGTAAGTCGGGCTCTGAACGATGGAACGTCCCGAGGCGATTGGGACCCAAGGTTTCTTACCAACGGC
GAGGCTTGACAAGTACTGGAGACGAGCATTGTCTTTAATAAGTGTGCTTTCCCATGAGACAGTTTTTGGTTGTTTGTATGGAGAGC
AAGGACTATCAATGTGGAACACTCTTAGATCTGAGGGATGGCCTCGTGGGTTATTTCCATTGCAGTTTAGTGATTCAGAGTTCAAG
AGTAAGAGAGAGATAAATAAAAAGAGGAGTTGGATTCTCATTTTGTTAGATCTTGATTAATTTGGTCTTTGTGGGTTTTAGTGTTT
GTGCTTGTGAGTGTGTGTGGGTTTATATATTGAATGATGCATGAGTGTTTAGGAAGTAATAAGAATTAAAAAATGAAGAGTGGTTT
TACTTGAGAGAACAGACTGTATCCCATCTCCTTTTTTCTTTCTGATTCTTTTGGGTCCACTCTAGGATCTCATACTCAAGGAGTTG
TAATTTGTGGTTTGCTTTGTGTATTATTCATTTGTTTTGTACACTGATAATTTAATACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34532 unnamed protein product [Thellungiella halophila]20096e-223
AAM66983 nucleoid DNA-binding-like protein [Arabidopsis thaliana]18814e-208
NP_191008 aspartyl protease family protein [Arabidopsis thaliana]18797e-208
XP_002877976 hypothetical protein ARALYDRAFT_906847 [Arabidopsis lyrata subsp. lyrata]18635e-206
XP_002299201 predicted protein [Populus trichocarpa]15104e-165

Swiss-Prot top hits (Blast detail)Scoree value
Q766C3 Aspartic proteinase nepenthesin-14545e-044
Q766C2 Aspartic proteinase nepenthesin-23963e-037

TrEMBL top hits (Blast detail)Scoree value
Q8L934 Nucleoid DNA-binding-like protein18813e-208
Q9M2U7 AT3g54400/T12E18_9018795e-208
A9PBM7 Predicted protein15103e-165
A9P9A2 Putative uncharacterized protein15022e-164
B9RG92 Aspartic proteinase nepenthesin-1, putative14898e-163

Arabidopsis top hits (Blast detail)Scoree value
AT3G54400.1 aspartyl protease family protein18802e-210
AT5G07030.1 aspartic-type endopeptidase14671e-162
AT1G09750.1 chloroplast nucleoid DNA-binding protein-related10226e-111
AT3G61820.1 aspartyl protease family protein5226e-053
AT1G01300.1 aspartyl protease family protein5182e-052

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
614  54%
 
81  4%
 
74  15%
 
104  15%
 
123  12%

Unigene MembersMember information