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Information for unigene UN19778

FASTA Sequence
Unigene ID: UN19778Length: 505 SSR 
GGAAATTGAATCAACTTCAGAAGAGCTCTTGCGAACTTAGGATCTGAAGATGCAGGCAAGTGATAGGTTTAACATCAACTCACAGC
TTGAACATCTTCAAGCCAAGTATGTTGGTACTGGCCATGCTGATTTGAGCAGATTTGAATGGGCTGTGAACATTCAGCGTGACAGT
TATGCTTCCTACATTGGTCACTACCCCATGCTTGCTTACTTTGCTATCGCTGAGAACGAGTCCATTGGACGTGAACGCTACAACTT
CATGCAGAAAATGCTTCTACCTTGTGGCCTTCCTCCAGAAAGAGAAGACGACTAAAGAGAGAGAGCTTGCAAGTGCTGTGTCGCAA
CTCTAATCAGAACCAAAAATAAATAAAAAGACTATCTTTCTACTGCATTCTGTCCTAATGCATTCATGTATTGAACCGTATAAAAC
TCTCTCTCTCTCTGGCTCTCCCATTGTGTAAACCAAATTGTTTTTAATTCAATGAAAAATTCTATGCTTTTTATG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002311676 predicted protein [Populus trichocarpa]4602e-044
NP_001152124 LOC100285762 [Zea mays]4584e-044
XP_002528840 Splicing factor 3B subunit, putative [Ricinus communis]4584e-044
XP_002285284 PREDICTED: hypothetical protein [Vitis vinifera]4584e-044
XP_002868290 hypothetical protein ARALYDRAFT_493471 [Arabidopsis lyrata subsp. lyrata]4584e-044

Swiss-Prot top hits (Blast detail)Scoree value
Q9LW64 Uncharacterized protein At3g233254547e-045
P58728 Uncharacterized protein At4g143424547e-045
Q9VHI4 Probable splicing factor 3B subunit 53061e-027
Q56K13 Splicing factor 3B subunit 52952e-026
Q9BWJ5 Splicing factor 3B subunit 52952e-026

TrEMBL top hits (Blast detail)Scoree value
A9PBX5 Predicted protein4602e-044
B4FQ12 Putative uncharacterized protein4583e-044
B9SS71 Splicing factor 3B subunit, putative4583e-044
C5XZL2 Putative uncharacterized protein Sb04g0099404583e-044
A9PDM1 Predicted protein4574e-044

Arabidopsis top hits (Blast detail)Scoree value
AT3G23325.1 splicing factor, putative4556e-046
AT4G14342.1 pre-mRNA splicing factor 10 kDa subunit, putative4556e-046

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
107  41%
 
63  18%
 
127  41%

Unigene MembersMember information