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Information for unigene UN19795
| FASTA Sequence |
| Unigene ID: UN19795 | Length: 984 |
SSR | SNP | GGACTTAGGAGTAGTGTGTGTAATATCATTGTTCTGCAGGATCTACAAGCAAAAAGCCCTCTCTATTTTCACTGTCTTCAATGCAG
TGACTCTATTTCTCTCTCTCTCTCTCTTTACCCACAACTCTTTGTTAGCTTCAAAACCTTCTCTTCTCTCTTCCATTCTCTCTCTC
TCACAGAGCAACAAGCTGCATCCAAATCCTGTGCTTAGCTCTGGTGCAACACTATGGCTGTCGTTGTTCTTGCTGTGATTTTGTTG
GCTATGGTTGGTCACTCAAGTGGGACATGGTGTGTATGCAGAGAAGGATTAAGCGAAGCAATGCTGCAGAAGACACTAGACTACGC
ATGTGGTGCAGGAGCTGACTGTGGACCCATTCACCAGAACGGACCTTGTTTCAACCCAAACACCGTCAAGTCTCACTGCTCCTACG
CCGTCAACAGCTTCTTCCAGAAGAAAGGTCAGTCTCAGGGAACTTGTGACTTTGCCGGCACAGCCACCGTCTCAGCCTCTGATCCC
AGCTACACTTCTTGTGCTTTTCCTGCAAGTGCCAGTGGAAGTGGGACAATGACACCAGTGACGACAACACCATCGACAAGAGTCCC
TACGACAACAAATACAAGACCCTACACAGTCACACCTCCAACAGGAGGAGGTTTGGGGATTCCAGCTGGTGGTTTCAACCCAGACT
ACACAGATCCATCCTATTCCTTTGGATCCAAACTCCAGAACCCAAGAGCTCTACCACTTTATTTTTTATCTGGATTCTTCTACTTG
TTGATCTAGTAGTAGACAACAACAACTAAGTTGGACTGTGGATCATGTGAATGTGGGTCTCTCTCTCTCACTAATGGAATCTTTTG
AGAGATAGACTTGTTTTGTTCAACCTTGTCTGTCATTTTCCCTAGCTGTTATCCACTTGGCTTTGAAAAAAAACAATTGTACATTT
TGATCTTTTTAAGTAAGGAGACAACAAATATTCAAGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002893006 hypothetical protein ARALYDRAFT_889285 [Arabidopsis lyrata subsp. lyrata] | 838 | 2e-087 |
| NP_564059 plasmodesmata callose-binding protein 3 [Arabidopsis thaliana] | 801 | 3e-083 |
| XP_002284112 PREDICTED: hypothetical protein [Vitis vinifera] | 541 | 4e-053 |
| ABK93473 unknown [Populus trichocarpa] | 504 | 9e-049 |
| ACU14839 unknown [Glycine max] | 500 | 3e-048 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FNQ2 Glucan endo-1,3-beta-glucosidase-like protein 2 | 489 | 2e-048 |
| Q9SD84 Glucan endo-1,3-beta-glucosidase-like protein 3 | 446 | 2e-043 |
| Q93V72 Glucan endo-1,3-beta-glucosidase-like protein At1g69295 | 344 | 1e-031 |
| Q9M069 Glucan endo-1,3-beta-glucosidase 7 | 266 | 2e-022 |
| P52409 Glucan endo-1,3-beta-glucosidase | 233 | 1e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FZ86 At1g18650 | 801 | 2e-083 |
| A9PAS0 Putative uncharacterized protein | 504 | 6e-049 |
| C6T016 Putative uncharacterized protein | 500 | 2e-048 |
| B9RLP4 Hydrolase, hydrolyzing O-glycosyl compounds, putative | 495 | 7e-048 |
| A5AZD0 Putative uncharacterized protein | 485 | 9e-047 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18650.1 PDCB3 (PLASMODESMATA CALLOSE-BINDING PROTEIN 3); callose binding / polysaccharide binding | 801 | 1e-085 |
| AT5G61130.1 PDCB1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 1); callose binding / polysaccharide binding | 489 | 2e-049 |
| AT5G08000.1 E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding | 446 | 2e-044 |
| AT2G03505.1 glycosyl hydrolase family protein 17 | 368 | 2e-035 |
| AT4G13600.1 EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: X8 (InterPro:IPR012946); BEST Arabidopsis thaliana protein match is: E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3); callose binding / polysaccharide binding (TAIR:AT5G08000.1); Has 804 Blast hits to 768 proteins in 66 species: Archae - 0; Bacteria - 9; Metazoa - 8; Fungi - 36; Plants - 728; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink). | 365 | 4e-035 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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