Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN19796

FASTA Sequence
Unigene ID: UN19796Length: 915 SSR 
GGGGTTTCGTCGTCGTCTCGCATCTCGCGTATCTCTTAAGCTTCTCTCTCTCTCAGATCTCTCGGTTAGTGAAAGATGGGGTTGAG
TTTCGCAAAGCTGTTTAGCAGGCTCTTTGCAAAGAAGGAGATGAGGATTCTGATGGTTGGTCTTGATGCTGCTGGTAAGACTACTA
TTCTCTACAAGCTCAAGCTCGGTGAGATTGTCACCACCATCCCCACTATTGGTTTCAATGTGGAAACTGTGGAGTACAAGAACATC
AGTTTCACTGTGTGGGATGTTGGGGGTCAGGACAAGATTCGTCCCTTGTGGAGGCACTACTTCCAGAACACTCAGGGTCTGATCTT
TGTCGTGGACAGCAACGACAGAGACAGAGTTGTTGAGGCTAGAGATGAACTGCACAGGATGCTCAATGAGGACGAGCTGCGTGATG
CTGTGTTGCTAGTGTTTGCCAACAAGCAAGATCTTCCTAACGCGATGAATGCAGCTGAAATCACAGATAAGCTTGGTCTTCACTCC
CTGCGTCAGCGTCACTGGTACATTCAGAGCACATGCGCCACTTCGGGTGAAGGACTGTACGAAGGTCTGGACTGGCTGTCCAACAA
CATCGCTGGCAAGGCGTAATGAGGGTGAGTTGCATTTTGCATCGAGATGATTGTATCTGCTGTGATGCAAGAAAACATTATAAATA
TTATCTGAACCTTTTTGCATATTGGGTATGTGAATGTTTTGATTGTGCAAGTAGATGTCTTGTCTCTAAAACTTACTAGAAGAACC
CATTTAAATAAGTTTTCCTGTATTTTGTTTGAATATGAATGTTATTTTCCTTTGGCGTATTTATTTGTAAGCGTCATACGTTATTT
TGTACCATAGATACATCAAAATGTTATTTTGCTTACGTCTCTGGACCCGGGTGTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177206 ADP-ribosylation factor 2 [Arabidopsis thaliana]9384e-099
AAT08648 ADP-ribosylation factor [Hyacinthus orientalis]9384e-099
AAC98042 Strong similarity to gb|M95166 ADP-ribosylation factor from Arabidopsis thaliana. ESTs gb|Z25826, gb|R90191, gb|N65697, gb|AA713150, gb|T46332, gb|AA040967, gb|AA712956, gb|T46403, gb|T46050, gb|AI100391 and gb|Z25043 come from this gene9341e-098
ACD37536 putative ADP-ribosylation factor [Brassica napus]9341e-098
XP_002888782 hypothetical protein ARALYDRAFT_476172 [Arabidopsis lyrata subsp. lyrata]9341e-098

Swiss-Prot top hits (Blast detail)Scoree value
Q9SRC3 ADP-ribosylation factor 29382e-100
P36397 ADP-ribosylation factor 19282e-099
O48920 ADP-ribosylation factor9247e-099
Q06396 ADP-ribosylation factor 19212e-098
P51823 ADP-ribosylation factor 29212e-098

TrEMBL top hits (Blast detail)Scoree value
Q677H6 ADP-ribosylation factor (Fragment)9383e-099
B2Z3W8 Putative ADP-ribosylation factor9347e-099
Q6ID97 At1g106309321e-098
B0LT37 ADP-ribosylation factor9293e-098
A9P9U3 Predicted protein9284e-098

Arabidopsis top hits (Blast detail)Scoree value
AT1G70490.1 ARFA1D; GTP binding / phospholipase activator/ protein binding9391e-101
AT1G23490.1 ATARF1 (ADP-RIBOSYLATION FACTOR 1); GTP binding / phospholipase activator/ protein binding9391e-101
AT1G70490.3 ARFA1D; GTP binding / phospholipase activator/ protein binding9391e-101
AT1G70490.2 ARFA1D; GTP binding / phospholipase activator/ protein binding9391e-101
AT1G10630.1 ATARFA1F (ARABIDOPSIS THALIANA ADP-RIBOSYLATION FACTOR A1F); GTP binding / copper ion binding / phospholipase activator/ protein binding9336e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
914  93%
 
211  7%

Unigene MembersMember information