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Information for unigene UN19798

FASTA Sequence
Unigene ID: UN19798Length: 1102  SNP
GGCTCTCTCTATATGTTTCTTTCTTTGTGGTATATAATACACAGCAACCCAACAATCAAGAAGATCAGATCATGGTGGGGTTTTTT
ATTTTCTCCTTATCAAGAAACCTCTGATCAGTCAAATACCCATCAATCAATCAAATCCCCAAACACTCCAAAAAAAAAGAGAGGAG
AGCTTCCAACTTCAAAGCCTTTTTCATCTTCTTAAAAAATGTCTATGTCGTCTATGTCTTCCCCTTCCTCAGCTGTTTTTTCACCA
GAGAACCTCTCACCAGATCCTCTCTCTCCTTCCGAACAGCTCTGCTATGTCCAGTGCAACTATTGCGAAACCATTCTTGCGGTTAG
TGTTCCTTACACAAGCATGTTCAAGACCGTAACCGTCAGATGTGGTTGCTGTACTAATCTTATTTCCGTGAACATGAGATCGCTTG
TCCTTCCAGCTTCTAACCAGCTCCAGCTCCAGCTTGGACCTCACTCTTACTTCACTCCCCAAAACATTCTGGGGGAGCTGAAAGAT
GCACCATCAAACATGAATATGATGATGATGAATCAACACCCTAATATGAATGACATCCCATCTTTCATGGATCTTCATCAGCAACA
TGAGATTCCTAAGGCACCACCCGTTAACCGCCCTCCAGAGAAAAGACAGAGAGTCCCATCCGCATATAACCGATTCATCAAGGAGG
AGATCCAACGTATCAAAGCTGGTAATCCTGATATAAGCCACCGAGAAGCTTTTAGTGCTGCAGCCAAGAATTGGGCCCACTTCCCC
CACATACACTTCGGGCTCTCGCCAGACAATCAACCCGTGAAGAAAACCAACATGCCTCAACAGGAGGGTGAAGACAACATGGGGAT
GAGAGAAGGGTTCTACGCTCCTGCGGCGAATGTTGGTGCGATTCCTTACTAAAGATAAATTTAATCAAGAAGTATTTAAGACTTTG
AAATCCAGTTTGTAGGGTTTATGTTGCCCAAAAGTAGGGTTTCTTTTTCTTTCTTGAACTTATATATGTTATATATGCTTGCGTTT
TCTTCTGTTGTTGTAATCAAAATCCTGCTAATTAATGAGGTTTGCTATGTTAGTTTTGATATGGTTAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACO92387 DBC43-3-2 [Brassica rapa subsp. pekinensis]11993e-129
XP_002882000 hypothetical protein ARALYDRAFT_903959 [Arabidopsis lyrata subsp. lyrata]10792e-115
NP_566037 axial regulator YABBY 1 [Arabidopsis thaliana]10731e-114
ACU23522 unknown [Glycine max]7217e-074
AAS10177 YABBY-like transcription factor GRAMINIFOLIA [Antirrhinum majus]7092e-072

Swiss-Prot top hits (Blast detail)Scoree value
O22152 Axial regulator YABBY 110735e-116
Q9XFB1 Axial regulator YABBY 36684e-069
Q2QM17 Protein YABBY 64481e-043
Q8L556 Protein YABBY 33683e-034
A2X7Q3 Protein YABBY 43648e-034

TrEMBL top hits (Blast detail)Scoree value
C3VIQ7 DBC43-3-211992e-129
Q0V811 At2g4519010737e-115
C6TKT2 Putative uncharacterized protein7215e-074
Q6SS00 YABBY-like transcription factor GRAMINIFOLIA7091e-072
B8XN36 Graminifolia protein7072e-072

Arabidopsis top hits (Blast detail)Scoree value
AT2G45190.1 AFO (ABNORMAL FLORAL ORGANS); protein binding / transcription factor/ transcription regulator10969e-120
AT4G00180.1 YAB3 (YABBY3); protein binding / transcription factor6684e-070
AT4G00180.2 YAB3 (YABBY3); protein binding / transcription factor5709e-059
AT1G08465.1 YAB2 (YABBY2); transcription factor2974e-027
AT2G26580.1 YAB5 (YABBY5); transcription factor2893e-026

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  26%
 
124  21%
 
63  16%
 
71  5%
 
84  21%
 
92  11%

Unigene MembersMember information