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Information for unigene UN19799

FASTA Sequence
Unigene ID: UN19799Length: 1152  SNP
GTAGTGATAAATCAGGTTGAGTAAAATCTTGGAACCATAATTGTTGTAGGAGACATTTTGACTGATGATTCAGGTTGAAAAAAAAA
AGAGAGTAAAACCAACTCTCAGCAGCAAACGAACATCCTAAACAGAAAATAGCCATGTTTGTGTGTTACCATTGAAAAAAAAAAGA
AATTGACTAAAACACAAAGAAACATAGAACCACTTTCCAAACATCAACTTAAGCAGAAGGTGTAGTCTCGTCAGCAGGTGATCAAG
CAGTTTTCTTCTTGATGGGTCCTAAAGAGACTTTAACCTTTGCTGGTCTCAGAACCCGATCTCCTAGAAGAAAACCCCGGGTAAGC
TCCTCGGTTATCATCCCTACCTTAACCGCCTCAGATTCTTCTCGCGAAATAGCCTCGTGCAACAAAGGATCAAATGGCTTGCCCAA
AGTTGGAATGGCTTTAACACGAAGGTGTCTCAAGACTTCAACGAATTGCCTGTAAATTCCCTGATAACTCGTATCGATCTTCTTCT
CCATCTCTGTATCGGGTTTAATCTGTTGCCTAGCGCTCTCAAAACTATCAATGAGTGGCAAGAGACTCTTCATGATTTGCAATTTA
GCGTTTGACTCTGTGCTAAGCCGATCCTTGTCAAGCTTTTTCCTTGTATTGTCAAAATCAGCCTGCAACCTGATTTTCGTGTCCTT
CTCTGAAGCTATCTTCATTGATAATGACAAAACCTTATGGTCGAATCTGTTCTTTTCCTTCTCGATTTCGCAAAAAACCGTTTCGA
TTTCCGTAACGGAGAGTTCGTCTCCGTTGGAGAGAGCTTGTTTATAAGCTTTAATCAGGGCTTCTACATCATTATTAGTTGGTGAA
GAAGCTTGGTGAGCAGAGAGAGATGATACGTAACTTCTCCGACTAGATACACACATGAACTGAACACCTCGGTTTAGTTTCGAAAT
GAATGGAGATGAAGGTCGTCTGCAATGGAAATGGATGGGTATGATTCTCGATTTTCCTGATGAAGATGGCGGAGGAGGATAGAGCG
ATGAAGAGGATGAGGAGGAGAAGCAATGAGTTACGGAAATCGCCATTGTCGGGACTGGATTTGGTACGGACTGGATCTAATTTCTT
TTCATTATACAAAACAGCGTTAAAGACATCTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893916 co-chaperone grpE family protein [Arabidopsis lyrata subsp. lyrata]8857e-093
NP_564475 co-chaperone grpE-like protein [Arabidopsis thaliana]8751e-091
AAM65596 putative heat shock protein [Arabidopsis thaliana]8722e-091
XP_002285824 PREDICTED: hypothetical protein [Vitis vinifera]6071e-060
XP_002301021 predicted protein [Populus trichocarpa]5684e-056

Swiss-Prot top hits (Blast detail)Scoree value
Q8DJB3 Protein grpE3461e-031
A2C5L7 Protein grpE3324e-030
A3PA63 Protein grpE3281e-029
A2BNE2 Protein grpE3281e-029
Q31DG8 Protein grpE3253e-029

TrEMBL top hits (Blast detail)Scoree value
Q9C8X4 GrpE protein homolog8757e-092
Q8LA37 GrpE protein homolog8722e-091
B9GUH1 GrpE protein homolog5683e-056
B9RJC6 GrpE protein homolog5503e-054
A9NPB5 GrpE protein homolog5137e-050

Arabidopsis top hits (Blast detail)Scoree value
AT1G36390.1 co-chaperone grpE family protein8791e-094
AT1G36390.2 co-chaperone grpE family protein8791e-094
AT5G17710.1 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization4776e-048
AT5G17710.2 EMB1241 (embryo defective 1241); adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization4776e-048
AT4G26780.1 AR192; adenyl-nucleotide exchange factor/ chaperone binding / protein binding / protein homodimerization1603e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  20%
 
103  30%
 
112  20%
 
92  20%
 
71  10%

Unigene MembersMember information