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Information for unigene UN19834

FASTA Sequence
Unigene ID: UN19834Length: 857  SNP
CCATTTAGAACATTATTTGTTTGTTGAATCTTCATTGATAATATAAGCTACAAAATCCAGCAACCAAGTCACAGCAACACAATTCT
TGCTACTTTCAAATATGTCTGAAATAAAAGTAAAAGGGCAAGTGTAATAGCCACCATAGAAGCAGCTGCGAGAGCTCAGAAGATTC
TTTGTGGTGGTCCCATTGTGCTCTTGAGGTACAAACACCTCACGTTTTGCCAGTTCTTCTTCAAGAGAGAGACGAGGAAGTTGACA
CTCATCTGGACATTCTGAAAGATGTGCTTCTCCTCCATGGAGAGGTTACCAACAGCAACACCCATACACAGAACCTTCTTCAGCTG
AAACTTCACTGTAGCCTTAGTTTCATTCACCTTCCCCTCCAGCGATTCCTGGTGGCTCACAAGCGTCGGGAACTTGCCTGCCTTGT
TGAGTCCAGGACCGAGAAGACGAGGGATCTGCTTGATGACGGATTCAGAGGCCAAGAAGGCGTGGTACTTCTTGGCAAGCTTCTTG
ACGAGCTTCTTGTTCTTGTTCAGTTTTTTCAGAGACTCCACGTCCATAGAGTCTAGCCCCATTTTCTCAGCCTCCTCGACGTGCTG
GGCGTCTCCGAGCATGCAGATCTTCATCTTGGGACGGGGAATGTGGGGTAACTTGACGGAACCACTGAAACGCTTGTCCTTTTGAG
GGTCATAATTTTTCAGACCAATCTGGAGCTCGAGAGTCTCAACAAAGTTGCGTTTCTTCTCTTCTGATTTTCCTCGGATTACAGTT
ATGGCTTCTTTAACAGCCTCACTCTGAAGCTTACTCATTTTGAGCTTGTCTCAAAAGATCTGATCCTGGATGATGAGACGGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563813 60S ribosomal protein L10a-1 [Arabidopsis thaliana]10541e-112
XP_002889688 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]10531e-112
NP_565654 60S ribosomal protein L10a-2 [Arabidopsis thaliana]10503e-112
XP_002879155 60S ribosomal protein L10A [Arabidopsis lyrata subsp. lyrata]10477e-112
XP_002282641 PREDICTED: similar to ribosomal protein L10a [Vitis vinifera]9877e-105

Swiss-Prot top hits (Blast detail)Scoree value
Q8VZB9 60S ribosomal protein L10a-110545e-114
P59230 60S ribosomal protein L10a-210501e-113
P59231 60S ribosomal protein L10a-39963e-107
Q9VTP4 60S ribosomal protein L10a-27884e-083
Q963B6 60S ribosomal protein L10a7777e-082

TrEMBL top hits (Blast detail)Scoree value
B7FGL9 Ribosomal protein9812e-104
C5YN77 Ribosomal protein9794e-104
A9NNS9 Ribosomal protein9785e-104
B7F9R7 Ribosomal protein9777e-104
B7F845 Ribosomal protein9769e-104

Arabidopsis top hits (Blast detail)Scoree value
AT1G08360.1 60S ribosomal protein L10A (RPL10aA)10554e-115
AT2G27530.1 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome10511e-114
AT2G27530.2 PGY1 (PIGGYBACK1); RNA binding / structural constituent of ribosome10511e-114
AT5G22440.1 60S ribosomal protein L10A (RPL10aC)9972e-108
AT5G22440.2 60S ribosomal protein L10A (RPL10aC)9972e-108

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  44%
 
85  56%

Unigene MembersMember information