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Information for unigene UN19837
| FASTA Sequence |
| Unigene ID: UN19837 | Length: 1156 |
SSR | SNP | GGGTAACTCATTGGTGTTCTTCATTTGATTTCGAGAGGTCAATAAAGTGACCAACTTTTGTTGCTTTTTTCTCATTCAATCAAAAC
CCCTCTGCACTTTTCTCTCTCCTTCTTCTTCATCTCAAGAATCTCTGAGTCTTCCTCCTGTAGACAGACATGGATGCTGTTTCACC
TCTCAGAGCTGTGTGTGGAAGCGCTGCTCAATACTCCGGGACTAGAATCGATCACGGGCTTTCTGGGTTTTGTTCATTTTCTCAGG
AAAACAAATCAAAACCGAAACTTTCACCGGTTATGAGCCTAGATTTGAAGGAACATCCCATGTCTTCAAACCAAACACTCACCGCC
TTGTCTTCTTCTTCTTCTTCCTATGTTGTTCCTACAAAGACATCATCAATTGGTATGAGTAGAGGGATGAGATGGTGGGAGAAGTC
AACGAAAGACAACATGTTAGAGATTCACTCTGCTAATCATCTCGTTGACTCTTTGCTTAACGCTGGTGATAGATTAGTTGTTCTTG
ATTTCTACTCTCCTGGTTGTGGTGGCTGCAAATCTCTCCACCCAAAGATCTGTCAATTGGCTGAAACAAACCCAAACGTGATGTTT
CTCAAAGTGAATCAAGAAGAGCTTAGAACAATGTGTCATGGCCTTAACGTCCACGTGCTTCCTTTCTTCAAGTTTTATAGAGGAGC
AGAGGGTAAACTGTGTAGTTTCAGCTGCACCATCGCCACCATTAATAAGTTCAAGAAAGCTTTGGACAAGCACGGTAGCGAGAGGT
GCAGCCTCGGGCCAGCGAAAGGTTTAGACAGTAAGGAGCTCATGGCTTTAGCGTCTGTAGGGGAACTTAAAATGAATCTGGATGTG
TTGTTGTCGTCGTTCCAATCAACTAGCAACTTCTGTTATGAAACAGAGCAACAGCATCAGAAGATGGTGGTATAAAGAGACGGGTC
TTTTCCATCAGGGCTCTTATTGATTTGTAGATATGATTATTGATTAGTATCATTGTGTTTTTGCTTGGAATCTATGGTTAGTTATT
ATGATTTACTAGTAGCTTAGTAAATCAAAACAGAACAAAAGTGAAGGTAAAGAGAGTTGGTTTATGCATCAGAGAGATTCCCATTA
AAGACTAAAAGTCAACACAGATTATTTCTGATGTCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200952 thioredoxin-like 1-2 [Arabidopsis thaliana] | 959 | 2e-101 |
| XP_002864732 thioredoxin family protein [Arabidopsis lyrata subsp. lyrata] | 919 | 8e-097 |
| XP_002514739 Thioredoxin II, putative [Ricinus communis] | 657 | 2e-066 |
| XP_002284847 PREDICTED: hypothetical protein [Vitis vinifera] | 644 | 6e-065 |
| CBI15208 unnamed protein product [Vitis vinifera] | 644 | 6e-065 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9XFI1 Thioredoxin-like 1-2, chloroplastic | 967 | 1e-103 |
| O64654 Thioredoxin-like 1-1, chloroplastic | 565 | 4e-057 |
| Q10M18 Thioredoxin-like 1-2, chloroplastic | 546 | 6e-055 |
| Q6Z4N3 Thioredoxin-like 1-1, chloroplastic | 540 | 3e-054 |
| O22779 Thioredoxin-like 1-3, chloroplastic | 532 | 3e-053 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RLX0 Thioredoxin II, putative | 657 | 1e-066 |
| A5C3U7 Putative uncharacterized protein | 644 | 4e-065 |
| A5BR33 Putative uncharacterized protein | 637 | 3e-064 |
| C6T8M7 Putative uncharacterized protein | 617 | 6e-062 |
| Q5ZF47 Thioredoxin 2 | 602 | 3e-060 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61440.1 ACHT5 (ATYPICAL CYS HIS RICH THIOREDOXIN 5) | 968 | 7e-105 |
| AT1G08570.1 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 565 | 4e-058 |
| AT1G08570.2 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 565 | 4e-058 |
| AT2G33270.1 ACHT3 (ATYPICAL CYS HIS RICH THIOREDOXIN 3) | 532 | 2e-054 |
| AT1G08570.3 ACHT4 (ATYPICAL CYS HIS RICH THIOREDOXIN 4); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 509 | 1e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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