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Information for unigene UN19870
| FASTA Sequence |
| Unigene ID: UN19870 | Length: 1761 |
SSR | | GAGTTATGAAAAGAATATACTTTATTTATTCGAATACAAGTAACAAATTTGCATTTTACATGAGAATAAGAATGGAAGAGAAAACA
GAGCAACTTCAGCACACACATGTGCTGAAGAAAATTACTCCTTTTGCGTATTCTCAACAATCAAGAATCAATCACCACTTTTTCTT
TTTCTATAGCTAAACCCTACAAATATATCACTGTAATATGACAAATGAGTCATTTATAAGTATTTTTTTCTTTTTTATAATGAATA
GTAAATCTATATGTATTTCTTAAATTGGAGGAGCATCTTGAGGAGTGAAAACCCTGTGGTGGCAAGTAGGGTTACAGGGATAAGGA
CAATCTATCTTCTGAAACAATTTTCTGTCATAAACCCAATCTCCAACAGCTTTTGCTATTGTCGTTCGGTTTAGAATTGGAGAATC
TTGCCAGAACCATGAAGTTTGTGTCTCGGTTTGGCAGTGAGTGTAACAAGAGTCTATGAACATCCCTCTTGATGAAGATCTACCTA
GACCTATCACCGCAACTCAAGAACTCTAACCTGAAATCTTGCATAACTTTCAGCTGGTTTGGTTGGCAATTCTTGATGTCAAGTTG
ACAACTTTGCCATTTTCCATAAGGATCAGCAGCACGGGGAGCCAAAATGTTCTTTATCTGCCAAGAGTCGTATGCGGCATTAAGAA
TGAATACAGGAGTTCTAATCTGGCGAGCTACGTATTGCGGGAAGAAGCACATTGCAGGGGTCAATCTTGATGTGCATGACCTCGGC
AAGTTCTTTGCTGATCCATGCAGAGTAACCACATCTTTGAAGTATGATTTAATGTATTGGGCTCCTGAGACATCTCTTGTATTGAG
AAAGAAACCAGCATCTGAAAGACATTTTACTTTGGTACCCATCGGTAACAGAGCACGGAAACTGTCACAATGCATCAGGGAAGCTA
ACCCGCCAGCAGAACACCCAGACAAAACAGCGTTCTCGGCGTTTCTCATGCCTTTAGCTAGCAACTCCTGCATAACGGCTAGCCAA
ACTCGAGCACCTCTGAAGTGAAGATTAGTAGCAGGGTTCACTGCTTGCACATCTCCTGTGAATGATGACCCGTCACAGTATCTAAC
TTTCACTCTGTTCCAATTGTAAAAATCAGGATTATATTGTTTCTTATTGCTAAGAATAGCTGAGAAGGCAAGATTCTCCACCATTT
TCTTGGATGAACCTAATCGAGTATGCATCCGACTAAGGCAGTTTGTTACATTATTACACCATCCTCCTCCCTCAAGCTGTATCAAC
CAGCTGTTGATTCCAGTTCCAGAACCTCTGTGTAAATGATAAGCTGGTGGACTGCCATCCAAACAAACGGCCCCTCTTGCGACGGC
GTTTCTAACAAATGTAATATTGACAAACAATCCTTCTGCTTTAAAGATTGCTAACAAACATACCACAAGAACCAACCATTGCTTGA
AGTTGAACATTTTGGAAACGCGGTTTCTCACAAAACCCAACTTGGGATTAGTCTGAACCTCCAAGTTTCGGTTTGTTAACTCGGAG
GATGACTCAGTTTCTGCACATTGCCCGAAGACGCGAGTTCGGAGCAATGGCGGGAGCAGAAAGATTCACGGAAGTAGTAAAGCGTT
TATGCAAAGCGCGTTTTGGATCCGACGTACAATGTTTTTTTTCTCTGTGTGTGTGTGTTTTCCGGAACCCGAGAGCCGACACTGAT
TCGTTCGTTTTTTTGCTAAAAGAAAGTTTAATAAAACATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193677 putative Pectinacetylesterase [Arabidopsis thaliana] | 1575 | 1e-172 |
| XP_002867938 pectinacetylesterase family protein [Arabidopsis lyrata subsp. lyrata] | 1528 | 4e-167 |
| NP_974575 putative Pectinacetylesterase [Arabidopsis thaliana] | 1436 | 2e-156 |
| XP_002519911 pectin acetylesterase, putative [Ricinus communis] | 1347 | 3e-146 |
| XP_002328835 predicted protein [Populus trichocarpa] | 1281 | 2e-138 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8R116 Protein notum homolog | 238 | 6e-019 |
| Q6P988 Protein notum homolog | 229 | 6e-018 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6DBP4 At4g19420 | 1575 | 9e-173 |
| Q3E9Z0 Putative uncharacterized protein At4g19420.2 | 1436 | 1e-156 |
| B9S1P6 Pectin acetylesterase, putative | 1347 | 2e-146 |
| B9N0N4 Predicted protein | 1281 | 1e-138 |
| B3V945 PAE | 1277 | 3e-138 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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