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Information for unigene UN19880

FASTA Sequence
Unigene ID: UN19880Length: 1354 SSR 
GGAATTCAAAGAGAGAGCTTTTATCTTGTCTATGTCTCGCATTGTATTCAGCATAATTCAAAAAGATCAAAAAGTCATATCTCTAG
AAGTACTGACCCAACCACATTCCCTGCAAAAAGGAGGGAAGGAAGAAACACATGTTCATATCATCATAACGAGTGGGTGATTGGTT
TCACCTCACTGGCTGCTGATTGTAGTGACTCTTCTCTTTCTTCTTCTTCTCCGCAGCCAGCTTTGCCTTCCTCGCAGCTGCTTCTT
GTGCCGCAACTTTTGCACCAGCATCCGTCTCTTTGCTTGATTTCTTCTTCTTCATCGATGCTATCTTCTTTAGCCGTTCTTTGATA
TCCATGGATGAAGAAGCCTCTTCCTCCTCCCCTTGCTCAACGGACTCACCTGCAGCAGCATCTGAGTTGCTCTTCACTTCATCCTG
AGATTCTTTTACCTCCTTCTGTTTATTCTTCTTTTTCTTCTTCTTGGAGGCCTTTGATTCCCCGCCCGCGTTCTCCTTCTTCTCTC
CCTCTCCATTGGCTTCCTTCTTCTCTTGCTTATCTTGAGAGTTATCTTGGCCGCCATTATTCTCCTTGGGTGCAATTCCAAAATCT
GCTAACAAAGCCTCAAACTCAGCAAGTTCCTTCTGTTTCAGCTCTTTCTTGGAAAGCTGCCTCTCTGGCTCCTTGGGTGGTGCAGC
AGCAACTTCAGGAGCCTTCTTCACTTCAGGCTCTGCTTCTGGATGAACTTGCGTCTCATGCTCCTCCTCCAAATCATCATCATCAT
CATCACCTTCGTCAAGAATGTCTTCTTCACTCTCACTTTCCTCAGCTTGAACCTCTTTCGCATCGGAACGGGACGCTTCAGAGGCA
CTCCAAAGGGCCTTGGGAGGAGCAGTGGTGGCGAAATAGTCATCATCTTCATCGTCGCTGTCGATATCCGCCCAAGCCTTGGCTTT
GAGAGGCGTAGGAGACCAGAAGACCTGCGGCTCAGGCTCCTCCTTCACCGGATCTTGACGTCCTTTGCTCTTGTCGGACGACGACT
TCTTCTTCTTCCTCCGAGTATCCAAAGCGGCGAACAAGTTGGTGTTCTGAATCGGCATCGATCCTTCGTCTCTCCTGTTTCCACCA
CCGACCATCTTATCTCACAACAACCACCGATTCAGATAGTAACAGATAAAAAGGTTTGATTTTTATAAGAACCCAGAAACGGAATT
CGGCGATTTCAGCTGGGAGTGTCGACGGATGGAAGGAGAAGGATCTGATGATGCGGCGGTTGTGGATAATTTAGGGTTACGGATCA
GAAACGAGAAAGGAAGAGAAGCAAAGTTGTTATCGAATGGGGTGGGGCTCTTTCTTTTTATTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CAA18600 putative protein [Arabidopsis thaliana]11814e-127
NP_194987 copper ion binding protein [Arabidopsis thaliana]11762e-126
XP_002867234 hypothetical protein ARALYDRAFT_328472 [Arabidopsis lyrata subsp. lyrata]11367e-122
XP_002880697 hypothetical protein ARALYDRAFT_901221 [Arabidopsis lyrata subsp. lyrata]10991e-117
NP_565603 uncharacterized protein [Arabidopsis thaliana]10542e-112

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701712e-011

TrEMBL top hits (Blast detail)Scoree value
O65538 Putative uncharacterized protein AT4g3261011813e-127
Q0WTS1 Putative uncharacterized protein At4g3261511761e-126
Q9SL96 Expressed protein10542e-112
Q8LFB4 Putative uncharacterized protein10532e-112
B9DH39 AT2G25670 protein10505e-112

Arabidopsis top hits (Blast detail)Scoree value
AT4G32610.1 unknown protein11812e-129
AT2G25670.1 unknown protein10602e-115
AT2G25670.2 unknown protein10602e-115
AT3G28770.1 unknown protein1579e-011
AT5G40340.1 PWWP domain-containing protein1327e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  40%
 
71  20%
 
211  20%
 
91  20%

Unigene MembersMember information