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Information for unigene UN19881

FASTA Sequence
Unigene ID: UN19881Length: 1146 SSR 
GAGTCAAGTTTTCCGATCCGGAAAACAACGGCTCCGAGGAGAGAACTCAACAGAGATGTCTCGTGGAGTCAATCGTCTCTCTCTTA
CCTTCAGACAAAGGACTTTTCCCGATCAACTTCCTCTGTTCTCTCCTCCGTTGCGCTGACTTCGTGAACACTTCACTCGCATGCAA
GAACGAGGTCGAGACACGAATCTCCGCCGTTCTTGAACACGTCACCGTCGATGATCTCTTGATACCTTCTTTCACCTACGACGGTG
AAAGACTATTAGACCTAGACAGCGTCGGGAGAATCATCTCCGGTTTTGCCGAAAGGGAGAAAAGCAAAGGGTTATGTTCTGTCTCG
CTACAAAGAGTTGCGAAGACCGTTGATTCTTATTTAGGGGAGATCGCTACTTGCTTGGGGCTCACGGTATCCAAGTTCAACGCGTT
AGCAAACCTTGTTCCGAAGTCCGCTAGAAAGTCAGAAGACGATCTCTACAGAGCGGTGGACATATTCTTGAAAGCTCATCCGAACC
TAGACGAGATCGAAAGAGAGAAAGTTTGTAGCTCAATGGACTCTCTCAAGCTTTCTTGCGACGCACGTCTCCACGCTTCGCAGAAC
AAGAGGTTACCGGTGAACATCGTTCTTCACGCGCTTTACTACGATCAGCTAAAGCTAAGAAGCGCGGTTGAAGATAAAGAAGGAGA
AGTAGTTATAGTCCCTGAGGCTTTAGCGACACGTGGACAGGTTAAAGCTGACACTACGTTGGCTAAAGAGAACGAAGCTTTGAGGA
GTGAGCTGATGAAGATGAAGATGTATGTTTCTGATCTACAGAAAAATGGTGGTGGAGCTTCTTCTTCGAATGCAACGGCCTTGGTG
AGCAATAAGAACAGCAAACATACTTTCTTCTCATCTGTTTCGAAGAAGCTTGGGAAGTTGAATCCGTTTAGACATGGGTCTAAGGA
TACTTCTAACATTGATGAGGATCTTGCTGGTGTTGATATTACTAAGCCAAGAAGACGAAGATTCTCAATCTCCTAAGTTAAGGAAA
CGTTTGATCTTTTAAGTTTGTGTGTGTGTGTGTTTGTGTGTATAAATTTCTTAGTCCAGTGTGCTCTCTTTTGTTTGCCTTTGATG
CGTGATTTCATTAAAGAAGTTTGGAAGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33924 unnamed protein product [Thellungiella halophila]14261e-155
XP_002319980 predicted protein [Populus trichocarpa]10641e-113
ADL36608 BZIP domain class transcription factor [Malus x domestica]10532e-112
ADL36607 BZIP domain class transcription factor [Malus x domestica]10433e-111
ADL36603 BZIP domain class transcription factor [Malus x domestica]10372e-110

Swiss-Prot top hits (Blast detail)Scoree value
Q682S0 Root phototropism protein 29751e-104
Q9FKB6 BTB/POZ domain-containing protein At5g488004803e-047
Q9FMF5 Root phototropism protein 32832e-024
Q5KS50 Coleoptile phototropism protein 12771e-023
Q9S9Q9 BTB/POZ domain-containing protein At1g304402724e-023

TrEMBL top hits (Blast detail)Scoree value
B9I769 Predicted protein10649e-114
B9T6L1 Root phototropism protein, putative10478e-112
B9INK2 Predicted protein10316e-110
Q0WKX4 Putative uncharacterized protein At2g305109752e-103
Q0WL22 Putative uncharacterized protein At2g305109752e-103

Arabidopsis top hits (Blast detail)Scoree value
AT2G30520.1 RPT2 (ROOT PHOTOTROPISM 2); protein binding9768e-106
AT2G30520.2 RPT2 (ROOT PHOTOTROPISM 2); protein binding9768e-106
AT2G30520.3 RPT2 (ROOT PHOTOTROPISM 2); protein binding9768e-106
AT5G67385.1 protein binding / signal transducer5044e-051
AT5G48800.1 phototropic-responsive NPH3 family protein4793e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  80%
 
91  20%

Unigene MembersMember information