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Information for unigene UN19918
| FASTA Sequence |
| Unigene ID: UN19918 | Length: 836 |
| SNP | GGAGTCGTACACGTTTTCATAACCCAGAACCTCTCTCTCCAGAAAAAAAAAGGAGAAGAAGAACGCTCCTTCTCTCCTTTTTATAC
TTTTGATCAAAATTCTTCACGAGGGAAACAATTTCGATTTCATAAATCACCGATTCTCGAGGGATGGCGGCGGTAAATGGGCACCA
AGGAAACACTCCGGCGGAGACAACCCCGGCGGCCACCGGATCGAAACAACCTGCTCCTCCGGCTAAACCCGTAGATAGCCACTCCG
TTCTCAAAAGGCTGCAATCTGAACTAATGGGTTTAATGATGGGAGGTGATCCGGGGATATCTGCTTTCCCAGAGGAAGACAATATA
TTCTGCTGGAAAGGAACAATCACTGGGAGCAAAGATACTGTGTTCCAAGGAACTGAGTACAGACTCTCCCTCGCTTTCTCCAACGA
TTACCCTTTCAAACCTCCCAAAGTTAAGTTCGAGACTTGCTGCTTCCATCCCAATGTCGACCTCTATGGCAATATTTGCTTGGACA
TTCTTCAGGATAAATGGTCATCGGCTTACGATGTGAGGACGTTATTACTCTCGATTCAAAGCCTTCTCGGAGAACCGAACATCAGC
TCGCCATTGAACAATCAAGCAGCTCAGCTTTGGAGCAATCAAAAAGAGTACAGGAAGATGGTTGAGAAGCTCTACAAACCATTGAA
CGCATGATTCTCGATGTAATTGGTACAGCTATATTATGATTTTCCAGAAGAAAGAGAAATCACTGCTTTCAATAGATCATGTTTCT
TCTACTTTGTAATCTCAGTTCGAGCCTATATTAGCAAATCAAAGACCCTTTTTATTAGAGTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885355 ubiquitin-conjugating enzyme 19 [Arabidopsis lyrata subsp. lyrata] | 901 | 6e-095 |
| NP_566653 ubiquitin-conjugating enzyme E2 19 [Arabidopsis thaliana] | 899 | 1e-094 |
| NP_564572 ubiquitin-conjugating enzyme E2 20 [Arabidopsis thaliana] | 855 | 1e-089 |
| AAM67229 E2, ubiquitin-conjugating enzyme, putative [Arabidopsis thaliana] | 849 | 6e-089 |
| XP_002513536 ubiquitin-conjugating enzyme E2 C, putative [Ricinus communis] | 773 | 4e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LJZ5 Ubiquitin-conjugating enzyme E2 19 | 899 | 5e-096 |
| Q8L7T3 Ubiquitin-conjugating enzyme E2 20 | 855 | 6e-091 |
| Q54XS6 Probable ubiquitin-conjugating enzyme E2 C | 540 | 2e-054 |
| Q9VTY6 Ubiquitin-conjugating enzyme E2 C | 515 | 2e-051 |
| Q95044 Ubiquitin-conjugating enzyme E2 C | 514 | 2e-051 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RIG7 Ubiquitin carrier protein | 773 | 3e-080 |
| A9PD53 Ubiquitin carrier protein | 769 | 8e-080 |
| A9PAG1 Ubiquitin carrier protein | 757 | 2e-078 |
| C6T5N5 Putative uncharacterized protein | 747 | 3e-077 |
| A5BHQ5 Ubiquitin carrier protein | 738 | 3e-076 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20060.1 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 900 | 3e-097 |
| AT1G50490.1 UBC20 (ubiquitin-conjugating enzyme 20); ubiquitin-protein ligase | 856 | 4e-092 |
| AT3G20060.2 UBC19 (ubiquitin-conjugating enzyme19); ubiquitin-protein ligase | 710 | 3e-075 |
| AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase | 326 | 1e-030 |
| AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase | 325 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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