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Information for unigene UN19919
| FASTA Sequence |
| Unigene ID: UN19919 | Length: 1275 |
| SNP | GCGGGTAAAATGCAAAGTTGTTAAGATTGAATTTTGATTGAAACCTGTGAAAACAATATTCAAATTAAAAAAAAAAAAGAGAAAAA
GTAACTACTAGAATATCTCGAAATGTATTTATAAAGAAAAAATCAAGAAAAAAATAGATGGGAGATGCCATCTTTTAAGAACTTGG
TTCAAATGCCACACTGGTCTGGTCCAGCCTTTTTTTGCTTTAACGTAACCCAACAAAGACCTAACACACTTTTCTTTTTATCTCCT
TTTGAGGAGAAAGTGAACACACACAAACTAAAGCTGCTTTGAGTTACTACTAAGGCGTGACCGAACGTGGTGGCGTCCTTGATTCC
CCTGGAGGAGTCTGACCCTCTGAACCTTTGGACGGGTCATCAGACGATTGTCTTAACCCGTCATCGGTTGTTTCACTTCTGTTCAC
ATCCTCAATCATTCTCAGCACTTCCTGCATCACCGGTCGTTGATCAGGAACCGTAGCGACACAAGCCATTGCGATTTGAAGAAGCT
GAACCATCTCTTCCTCTATGTTGTGGTACCGCATCAGCTCGACATCGAACACTTCAGCGGTCCATTCTTCTCTAACCACAGACAGC
ACCCACCGAGGCAGATCAATGCCTTCTTCGCCAAGTGATGCCTGGTTTGGTGATTTGCCAGTCAACAGTTCAAGCAGCAACACCCC
GAAACTGTACACATCCGATTTGAAAGTTACTTTCCGTGTCTCGAGAACTTCGGGAGCATGATAACCCGCCAAACGGTTTGGTGGAC
TCGAGTTACTGAACAGTTGGTTAAGTCCATAGTCAGAGACGCAAGTGTCTTGGTTTGGTTGTAGGAGTATGTTTGAGGCTTTGATG
TTTCCGTGTACCAATTTGGCTGAAACATGAAGATGGGCTAAACCTCTCGCTGCAGTTATTGCTATTCTCATACGGTTATCCCAGTC
TAACGGAGTTCGTCCCGATCCACGGCTCCCGTGAAGGAGAGCAGAGAGGCTTCCGTTGGGCATGAAATCAAAGACAAGAAGCTTCT
CATCTTTAGAGTAATAATAAGCTCTCAACGGAACAACATTCGGGTGTTTAACTCTGCCGACAATCTCCATCTGCGACTCGAACTCT
TTCTTGGTCGCCGCCACGTCCTTCAAACGCTTCACGACCACCGTGGTGCCTTCCTCCAACACCGCCTTATAAGACGTCCCCACGCT
TCCTTTCCCCAAAACCTCCGCCGAAGCTCTCAGCAGATCCTCCAGATCGAAATTGTAGATCCCTCCTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180241 putative inactive receptor kinase [Arabidopsis thaliana] | 1607 | 2e-176 |
| XP_002879005 hypothetical protein ARALYDRAFT_481544 [Arabidopsis lyrata subsp. lyrata] | 1603 | 5e-176 |
| AAK92807 putative receptor protein kinase [Arabidopsis thaliana] | 1599 | 1e-175 |
| XP_002281635 PREDICTED: hypothetical protein [Vitis vinifera] | 1430 | 5e-156 |
| XP_002324958 predicted protein [Populus trichocarpa] | 1429 | 7e-156 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48788 Probable inactive receptor kinase At2g26730 | 1607 | 7e-178 |
| Q9LVM0 Probable inactive receptor kinase At5g58300 | 1029 | 7e-111 |
| Q9SUQ3 Probable inactive receptor kinase At4g23740 | 947 | 2e-101 |
| Q9C9Y8 Probable inactive receptor kinase At3g08680 | 939 | 2e-100 |
| Q9FHK7 Probable receptor kinase At5g05160 | 871 | 2e-092 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0LGL2 Leucine-rich repeat receptor-like protein kinase (Fragment) | 1607 | 1e-176 |
| B9ILH3 Predicted protein | 1429 | 5e-156 |
| B9STM4 Nodulation receptor kinase, putative | 1405 | 3e-153 |
| D6N3G3 Protein kinase | 1400 | 1e-152 |
| B8LN40 Putative uncharacterized protein | 1241 | 3e-134 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G26730.1 leucine-rich repeat transmembrane protein kinase, putative | 1608 | 5e-179 |
| AT5G58300.1 leucine-rich repeat transmembrane protein kinase, putative | 1028 | 8e-112 |
| AT5G58300.2 leucine-rich repeat transmembrane protein kinase, putative | 1028 | 8e-112 |
| AT4G23740.1 leucine-rich repeat transmembrane protein kinase, putative | 947 | 2e-102 |
| AT3G08680.1 leucine-rich repeat transmembrane protein kinase, putative | 929 | 2e-100 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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