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Information for unigene UN19934

FASTA Sequence
Unigene ID: UN19934Length: 614  SNP
GGGAGGTTCTAGGGTTTTAGTTGTTTCTCTTCTCTTCTCGGAAAAAAAAAAAAAAAGAAAAGAAGAAGACATGTCGGCAGTTTCTA
GGGTTTTCGGAGGATGCAGGACACTGATGGCAAAGGCGGCGAATAATGCGGCGGCGGCGGCAGCAAGCGGTGGAGCTGGTAAAGAA
GGAAAAGGGATACTCAAGACAGTTCCGGTCTCACAGACGCTGGCTAGCTTCGCCGGAGAAAGCGAGCTCTCTCGTGCCACCGCCGT
GAAGAAAGTGTGGGAGCATATCAAGGGAAACAACCTCCAGAATCCAGAAAATAGGAAGCAGATCATATGCGACGATAAGTTGAAGA
CAATCTTCGGTGACAAAGACACAGTTGGATTCACAGAGATCGCAAAGCTCTTGTCCCCACATTTTCCCAAGTCTGTCTAATTTGGT
GATGTAGTCTCATTATCATATTAGTTTGCTATCTTTTGGTTCGTTTTTGATGTATATGAAAAAGAAGCAAAACTATGCTTGATCCA
TCAGTAAGTGGAATATTTATGTATTCTGACAATTGTTTTTTTATCATGATCTTGTTTGGTTTGGGATCTTTTTGATATTTGGTGAT
CTTTGAGTCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879559 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]3816e-035
XP_002893684 SWIB complex BAF60b domain-containing protein [Arabidopsis lyrata subsp. lyrata]3808e-035
NP_564382 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]3646e-033
NP_565810 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana]3565e-032
AAQ24534 SWIb domain-containing protein [Solanum chacoense]3233e-028

Swiss-Prot top hits (Blast detail)Scoree value
Q08747 Upstream activation factor subunit UAF301734e-012
Q05024 Protein TRI11582e-010
O74503 Upstream activation factor subunit spp271555e-010

TrEMBL top hits (Blast detail)Scoree value
Q9C504 At1g317603644e-033
Q93W30 Expressed protein3563e-032
Q6V9I4 SWIb domain-containing protein (Fragment)3232e-028
Q6Z6Y2 Os02g0130000 protein2802e-023
A2X0H7 Putative uncharacterized protein2793e-023

Arabidopsis top hits (Blast detail)Scoree value
AT1G31760.1 SWIB complex BAF60b domain-containing protein3787e-037
AT2G35605.1 SWIB complex BAF60b domain-containing protein3779e-037
AT3G48600.1 SWIB complex BAF60b domain-containing protein2756e-025
AT4G34290.1 SWIB complex BAF60b domain-containing protein2372e-020
AT3G03590.1 SWIB complex BAF60b domain-containing protein2362e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  22%
 
82  22%
 
64  44%
 
121  11%

Unigene MembersMember information