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Information for unigene UN19938
| FASTA Sequence |
| Unigene ID: UN19938 | Length: 2040 |
SSR | | GGCAGCTGTGGGGAATTCAGATGGGTGAGCACATAAAGATCCGTTTTTATAAAGTTAAGGATATTGAGGCGAGACAAACATAAAAA
GGTGTGAAGCTTGATTGGAAGATTGAAGAAAGAGTTTATCTCTATGTTAATGAAGTTGCAGGAGATGAATGTAAGCAAGGATGATA
AAAGAAGCAGAAACACTAAGACCTAACTGTGATGTTCTGAATAATTCTTGTCCTAGAGTGAACCAGAAGTAGGGAAGCCTAGAAAG
CAAGTGATACAATACAAGTAAGTTCAAGCCGAAGAAGAAAGAAGCAGCAATGGCCAATCTCAAGAAGAAGCTGAAGGATATCCGAG
AGCAAACCCGGTTTGTTTCACCTAGACCCTTGACTCAGCTAGACTAAAAAACCAGAACAATGTTTATCATCTAGTTTATTACTTGG
GCCCAAGATCTTGGTGGATCAGGCCCAGTTCTAGTTACTTTCGGTTCTAAGAAAACCCTGGGAGGATTTGTTTGCTTCTTCTCGTC
CGTCTTCGTCACTTTAGACATCTGATTTCCGGTGTTTTGTCTCTCCCTCTCACTCGCGTTTAAACTCTTGCCTTGGCGCTGTCTCC
GTGAGCTCTCTCTGCAACCATGTCGACTATTATGCAGAAGATCAAAGAAATCGAAGATGAGATGGGTAGGACACAGAAGAATAAAG
CCACCGCGCATCATCTCGGTTTGTTAAAGGCGAAACTTGCTAAGCTACGAAGGGACCTTCTTGCACCGCCTACCAAAGGTGGTGGT
GCTGCTGCTGGCGAAGGTTTTGATGTGACAAAAAGTGGAGATTCTAGAGTTGGACTTGTTGGGTTTCCTTCCGTTGGCAAATCTAC
CCTCTTGAACAAACTGACGGGAACGTTTTCTGAGGTTGCTTCTTATGAGTTCACAACATTGACATGCATTCCCGGTGTTATTACAT
ACCGTGGAGCTAAAATTCAGTTATTAGATCTTCCTGGTATTATCGAGGGTGCCAAGGACGGAAAAGGTAGAGGACGACAGGTTATA
AGTACTGCTAGGACTTGCAACTGCATCTTAATAGTTCTTGATGCCATAAAGCCAATAACTCACAAACGTCTCATTGAAAAAGAGCT
CGAAGGATTCGGAATAAGGTTGAACAAGGAGCCACCTAACCTTACATTCAGGAAAAAAGACAAAGGTGGTATCAATCTAACGTCTA
CAGTCACTTCGACACACCTTGACCTCGATACTGTAAAGGCGATTTGCAGTGAGTACAGGATTCACAACGCTGACATCACTCTGCGC
TATGATGCCACGGCTGATGACCTCATAGATGTCATAGAGGGCAGTCGGATCTATATGCCATGTATCTATGCTGTCAACAAGATCGA
TCAGATCACCCTCGAGGAACTTGAAATTTTGGACAAACTTCCTCACTACTGTCCTATTAGTGCGCATCTGGAGTGGAATCTTGATG
GTCTTCTCGATAAGATATGGGAATACTTGAATCTAACCCGAATCTACACCAAACCAAAGGCAATGAATCCGGATTATGATGACCCT
GTTATCTTATCTTCCAAGAAGCGGACTGTTGAGGACTTCTGCATCCGGATTCACAAAGACATGCTTAAACAATTCAAGTATGCTTT
GGTATGGGGTTCGAGTGCCAAACACAAGCCACAGAGAGTTGGAAGGGAACACGAGCTTGAGGACGAGGATGTTGTTCAGATCGTTA
AAAAGATATGATTTCTCCAGTAGTTCATGGAGAAGCTGAAAGACCAAAGTTAGCCATAATGAGCTCATATTACATAGAAAGAAGGT
TTGGTTTTCTCAGCTTATCTTCTTCTTCTTCTTGTACTCGTGTGTGTATTATTGTCTGGTCCTGACGAAAACTGTCTGCACCTTTT
TGTCTTATTGGATAAGTAAATCTTTTTTTTTTGACGATAGCATGTAATTTGAGGTCTTGAGACGTTTAGAAAATTGGTTCGGTTCG
GTTTTGCTAGTTCAGAATATTAAGTTATTTGGGTGGCAATAAATAACATGAAAGTTAGTTTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002868910 hypothetical protein ARALYDRAFT_912415 [Arabidopsis lyrata subsp. lyrata] | 1869 | 1e-206 |
| NP_195662 GTP-binding protein-relatedlike protein [Arabidopsis thaliana] | 1861 | 1e-205 |
| ACU21287 unknown [Glycine max] | 1804 | 4e-199 |
| XP_002532275 developmentally regulated GTP-binding protein, putative [Ricinus communis] | 1802 | 7e-199 |
| XP_002310030 predicted protein [Populus trichocarpa] | 1801 | 9e-199 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54HP3 Developmentally-regulated GTP-binding protein 1 homolog | 1424 | 2e-156 |
| Q3MHP5 Developmentally-regulated GTP-binding protein 1 | 1408 | 1e-154 |
| Q9Y295 Developmentally-regulated GTP-binding protein 1 | 1408 | 1e-154 |
| P32233 Developmentally-regulated GTP-binding protein 1 | 1405 | 3e-154 |
| P43690 Developmentally-regulated GTP-binding protein 1 | 1397 | 3e-153 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SVA6 GTP-binding-like protein | 1861 | 7e-206 |
| C6THI5 Putative uncharacterized protein | 1804 | 3e-199 |
| B9T206 Developmentally regulated GTP-binding protein, putative | 1802 | 5e-199 |
| B9HG22 Predicted protein | 1801 | 6e-199 |
| A8WE95 Developmentally regulated GTP binding protein 1 | 1787 | 3e-197 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G39520.1 GTP-binding protein, putative | 1862 | 3e-208 |
| AT1G17470.1 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 1087 | 2e-118 |
| AT1G17470.2 ATDRG1 (ARABIDOPSIS THALIANA DEVELOPMENTALLY REGULATED G-PROTEIN 1); GTP binding / GTPase | 1087 | 2e-118 |
| AT1G72660.1 developmentally regulated GTP-binding protein, putative | 1085 | 4e-118 |
| AT1G72660.2 developmentally regulated GTP-binding protein, putative | 1085 | 4e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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