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Information for unigene UN19959

FASTA Sequence
Unigene ID: UN19959Length: 906 SSRSNP
AAACCATCATAAATACCATCACCGGATTCACATGATTCCACAACTCTTCTGAATCTGTCACTTTCTTTTTTCATGTATCATTGTCT
TATTAATTTTTGAATTTGTTTTTATTAGAGGTGGTGGAGTATTGAAAGCTATATGTCTTGAAGGGTGTATGTATTAATGCCAGAGC
CAGTCTTGCTTCTTAGCTTATTGTCAAGTTGTTTTCTTTCTTAGTTACTTGACATATAAGGAACAAACGATATGAATAGTGGTTCT
TGTTCGTCTTTAATGGATGTGGGTTATGATCATCATCATCATCATCATCATGGTCATGAAGAGCTTCATGTTTTGGCCGTGGATGA
TAATCTTATTGACCGTAAACTCGTAGAGAAGTTGCTCAAGATCTCCTCTTGCAAAGTTACAACAGCAGAGAATGCGATTAGAGCAT
TGGAGTATTTGGGTTTGGGAGATCAAAATCAGCATATTGATACACTGGCCAATAATGATTTGAAGGTTAATCTAATCATCACAGAC
TATTGCATGCCAGGGATGACAGGCTTCGAGCTACTAAAGAAGGTGAAGGAGTCATCATATCTGAAAGAGGTCCCTGTTGTGATAAT
GTCTTCAGAGAACATTCCTACTCGCATCAACAAATGTTTAGCTAGTGGAGCTCAAATGTTTATGCAGAAGCCTCTGAAACTATCGG
ATGTTGAGAAACTTAAATGCCATCTCATGAACTGTAGAAGCTGACAATTACATGTAGCCCTAACCATAAAATATTTCCTTATCTTG
GTTCCTTATTTGATTGTGTTACACGTTTTTTGTGTCTTCTGAAAATCAAGTCATGTTTTCAAAATAGCAAATCTTAAGCTACACAC
ACAAAAAGAAATGTAAGGAATATATAAAATGATTATGGTTCTGAAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879884 hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp. lyrata]7162e-073
NP_181599 two-component response regulator ARR16 [Arabidopsis thaliana]7143e-073
NP_001189722 two-component response regulator ARR16 [Arabidopsis thaliana]7028e-072
NP_567037 two-component response regulator ARR17 [Arabidopsis thaliana]6023e-060
XP_002876364 predicted protein [Arabidopsis lyrata subsp. lyrata]5925e-059

Swiss-Prot top hits (Blast detail)Scoree value
Q9SHC2 Two-component response regulator ARR167142e-074
Q9FPR6 Two-component response regulator ARR176021e-061
Q7G8V2 Two-component response regulator ARR154211e-040
O82798 Two-component response regulator ARR44183e-040
Q9SB04 Two-component response regulator ARR54183e-040

TrEMBL top hits (Blast detail)Scoree value
B4G294 At2g406707142e-073
B9IQ64 Type-a response regulator5475e-054
B9S4F7 Two-component system sensor histidine kinase/response regulator, putative5432e-053
Q71BZ3 Type-A response regulator4947e-048
C6SX49 Putative uncharacterized protein4875e-047

Arabidopsis top hits (Blast detail)Scoree value
AT2G40670.1 ARR16 (ARABIDOPSIS RESPONSE REGULATOR 16); transcription regulator/ two-component response regulator7151e-075
AT3G56380.1 ARR17 (ARABIDOPSIS RESPONSE REGULATOR 17); transcription regulator/ two-component response regulator6031e-062
AT1G74890.1 ARR15 (RESPONSE REGULATOR 15); transcription regulator/ two-component response regulator4211e-041
AT1G10470.1 ARR4 (RESPONSE REGULATOR 4); protein binding / transcription regulator/ two-component response regulator4183e-041
AT3G48100.1 ARR5 (ARABIDOPSIS RESPONSE REGULATOR 5); transcription regulator/ two-component response regulator4183e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  24%
 
126  35%
 
94  24%
 
113  18%

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