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Information for unigene UN19968

FASTA Sequence
Unigene ID: UN19968Length: 573  SNP
ACACTTAACAATTGTTTCCTTCCAACTCTCGCTCTCTCTTAAACTTTCTTCCTCTCTCGCAAAATGAAGCTTTCTTTGCGTTTGAT
CTCAGCTGTTCTCCTCATGTTTATGATATTCGTCGCTTCAGGGATGGGTCCAGTCACCGTGGAGGCACGCACGTGTGAGTCGAAGA
GCCATAAGTTCAGGGGTCCTTGTGTGAGCAGACACAATTGCGCAAATGTGTGCCACAACGAAGGTTTTCATGGAGGTAAATGCCGT
GGGTTCCGTCGTCGTTGCTACTGTACCAGACACTGCTGATTTATCCATCTCAATCGATTCTCATAACTCGAATCTTCAATCCGCCG
TCTCGTCTCTTCTCATCGTGTTTGTTTCTTTTTTCTTCTTTTCGAAAATTTTCTCGTGTTTGTTTCTTTCTGTCTAATATTTCTTA
CAGTGCCATGTTGTACTGTGTCTGTGTGTGTGTTTAATGTGTTTTCGAATAAGTCTTTGTTTTGTGTGTTTTTCGTTTTATTGTAA
TGTTAAATTCTAATGTTTTTTAAAGAAAATCAAGAAGCGTCTACAGAGTTACCTAAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875115 hypothetical protein ARALYDRAFT_484136 [Arabidopsis lyrata subsp. lyrata]4003e-037
NP_178321 defensin-like protein 1 [Arabidopsis thaliana]3896e-036
NP_178319 defensin-like protein 2 [Arabidopsis thaliana]3701e-033
AAA91049 protease inhibitor II [Brassica rapa]3701e-033
ACQ90607 defensin-like protein [Eutrema halophilum]3493e-031

Swiss-Prot top hits (Blast detail)Scoree value
Q9ZUL7 Defensin-like protein 13893e-037
Q39182 Defensin-like protein 23705e-035
Q41914 Defensin-like protein 43266e-030
P82659 Defensin SD22845e-025
Q9C947 Defensin-like protein 52747e-024

TrEMBL top hits (Blast detail)Scoree value
Q39403 Protease inhibitor II3707e-034
C7SI25 Defensin-like protein3492e-031
C7SI24 Defensin-like protein3482e-031
B9RJ36 Low-molecular-weight cysteine-rich protein LCR69, putative2901e-024
B6SJ49 Flower-specific gamma-thionin2873e-024

Arabidopsis top hits (Blast detail)Scoree value
AT2G02130.1 LCR68 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 68); peptidase inhibitor3902e-038
AT2G02100.1 LCR69 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 69); peptidase inhibitor3714e-036
AT2G02120.1 PDF2.1; peptidase inhibitor3275e-031
AT1G61070.1 LCR66 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 66)2755e-025
AT2G02140.1 LCR72 (LOW-MOLECULAR-WEIGHT CYSTEINE-RICH 72); peptidase inhibitor2281e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
77  41%
 
84  24%
 
122  12%
 
62  12%
 
102  12%

Unigene MembersMember information