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Information for unigene UN19987

FASTA Sequence
Unigene ID: UN19987Length: 1195  SNP
GGGTCGGATCCAAAAGTCTCTCTCTCTGTCTCTCGATGGCTTCTTCGTCTTCTTCATCATCATCTCCGACGCCGGATGCTGCAGTG
ACCGCGATGGAGGAGGAGCTGACTCTAATAGTGAAATGGAGCGGGAAGGAGTACACACTCCGAATCTGCGCAGACGACTCAGTTGC
TGAGCTGAAACGTCGCATCTGCTTTCTCACCAACGTCTTGCCCAAGCGCCAGAAGCTTCTTTACCCCAAAGTCGGAAACAAGCTCT
CCGACGACTCTCTTCTGCTCTCGCAGATCCCACTCAAGCCTTCTCTCAAGATGACCATGATCGGTACTACGGAGGATGATATAATA
GTAGATCAAGTAACATCGGATGACATTGTTGATGACTTTGAGCTTGGGAAGGACGAAGTGGTGGATATTAAGGACAAAGAGCTTAA
TAAGCAGAAGCTGAGGAGGAGAATTGATCAGTACAAGATTAAGCTTGTTAATCCATGTCGCAAAGGGAAGAAACTACTTGTTCTAG
ATATTGACTACACTTTGTTTGATCACCGTTCCACTGCTGAGAACCCCTTGCAGCTTATGCGTCCTTATCTTCATGAGTTTCTTACT
GCTGCTTATGCAGAATATGATATCATCATATGGTCTGCCACTAGCATGAAGTGGGTTGAGTTAAAGATGGGAGAGCTTGGTGTGCT
GAACAATCCCAACTACAAGATCACAGCCCTTCTCGACCATCTAGCCATGATCACAGTTCAGTCAGACTCTCGTGGAATCTTTGATT
GCAAGCCACTAGGCTTAATTTGGGCACTGTTGCCTGAGTTCTACAACGCCCAAAACACTATCATGTTCGATGATCTGCGAAGGAAC
TTCGTGATGAACCCTCAAAACGGTCTTAAAATCAGGCCGTTTAGGAAAGCTCATGTGAACCGAGACAAGGATGACGAGCTTGTATT
GCTGACTCGGTACCTTCTGGCAATATCAGAGCTTGATGATTTGAGTTCTTTGGATCATAGCAGATGGGAGACATTCTCAGAAGACA
GTGTCAAAAGGCGCAGGCACACATAACTTTCCTAACTTTTTTTCTTATTGGCATTGTTTAGATATGTTGTTGTTGTTGCTGGCTAC
TTCGTATGTTTTTATTGTTTAGAAATACAATCAGTTTATCTTTTATTAAGCAATATGAAGTTAAGTACTATGAGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874475 ubiquitin family protein [Arabidopsis lyrata subsp. lyrata]14942e-163
NP_849320 ubiquitin-like domain-containing CTD phosphatase [Arabidopsis thaliana]14833e-162
XP_002533028 conserved hypothetical protein [Ricinus communis]14637e-160
XP_002265791 PREDICTED: hypothetical protein [Vitis vinifera]14172e-154
XP_002331491 predicted protein [Populus trichocarpa]14063e-153

Swiss-Prot top hits (Blast detail)Scoree value
Q8W3M6 Ubiquitin-like domain-containing CTD phosphatase14832e-163
Q5ZJJ8 Ubiquitin-like domain-containing CTD phosphatase 19185e-098
Q5FWT7 Ubiquitin-like domain-containing CTD phosphatase 19168e-098
Q8BGR9 Ubiquitin-like domain-containing CTD phosphatase 19151e-097
Q2KJD7 Ubiquitin-like domain-containing CTD phosphatase 19132e-097

TrEMBL top hits (Blast detail)Scoree value
B9T459 Putative uncharacterized protein14635e-160
B9N8A0 Predicted protein (Fragment)14062e-153
B9GZ51 Predicted protein13533e-147
C6T717 Putative uncharacterized protein13515e-147
C6T932 Putative uncharacterized protein13239e-144

Arabidopsis top hits (Blast detail)Scoree value
AT4G06599.1 ubiquitin family protein14831e-164

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  18%
 
111  9%
 
86  55%
 
92  18%

Unigene MembersMember information