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Information for unigene UN19992

FASTA Sequence
Unigene ID: UN19992Length: 634 SSR 
GGATCGCACGGATCCAAATCCAGATCATTACCGAAGAAGAAGAAGAAGAAGACACGCACCATCCATCCATCTCCAAGAGGGAGCTT
TGATTTGAATCTGAATTTTGATCAAAAGATGGGTTTCCTGATAACAAGCCTAATCTTCGTGGTCGTTGGGATAATTGCTTCTCTGT
GCGTTCGAATCTGCTTCGCTAGAGGTCCCTCCACAAATCTGCTTCACTTCACCTTGGTCATTACTGCCACGGTCTGCTGCTGGATG
ATGTGGGCGATTGTATACATTGCACAGATGAATCCTCTGATTGTCCCAATCCTAAGCGAAACAGAGTAGCATCCTCTCACTCAAAC
TCACTCAGGCTATGCGCAAAGTGAGTGGTAATACCGGGTTGCTTGCCTTCTTCTGCTTTCGATTCTTGTGTATCTTCAATCTTTTA
AATGGGTTTGTAATTCTGTTTCCTAGTGTGTGAACAAAATCCATAAACTTTTTGCCTCTGTATTATTGGAAATTTCCATGTATTCT
ATTCCCAAAACAAGCTGAGATGCTCAAAACAATGTATTTGTTGTTGAAATAATGTCTTTGAGAGGGACGAGGTTTTATCCGTCCTT
TTATCACACAGTAATGTTTTTATGTTGTTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568823 ATPase, V0 complex, subunit E [Arabidopsis thaliana]3404e-030
XP_002866085 ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata]3332e-029
NP_194401 ATPase, V0 complex, subunit E [Arabidopsis thaliana]3234e-028
XP_002869594 ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata]3208e-028
XP_002317354 predicted protein [Populus trichocarpa]3181e-027

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FLN5 AT5G55290 protein3403e-030
Q9SZ13 Putative uncharacterized protein3233e-028
A9P8S8 Predicted protein3181e-027
Q8GUB2 Vacuolar ATPase subunit e-like3162e-027
A9P9Z7 Predicted protein3091e-026

Arabidopsis top hits (Blast detail)Scoree value
AT5G55290.1 ATP synthase subunit H family protein3411e-032
AT5G55290.2 ATP synthase subunit H family protein3411e-032
AT4G26710.1 ATP synthase subunit H family protein3241e-030
AT4G26710.2 ATP synthase subunit H family protein3241e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  23%
 
124  31%
 
106  46%

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