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Information for unigene UN19994
| FASTA Sequence |
| Unigene ID: UN19994 | Length: 1254 |
| SNP | GTTGAAAAACCATGTGTATTTCTTCTGTTCTGAGTACAATATATTATATAAAACATCCAGCACAATAATACTTCCACGGAAAGAAA
GAAAAGTTTAATATTTGAATCTTTATTCAATTGTGTGATATTTACCTGAGATCGATCACATTTTATTCTCGAGAGAAAACCACAAT
GGAGAAGATGAGATAGAGATTTAAGGATCAAAGAGCTGCCATGGAGTGCACTGAATCAATGACAGCGTCGATAAGGTCATGAGACT
TGCTTGTACCTGCAAGCGTCAGATGTTTTGGTGCTTCTGCTCTATCGAAATAGAATGCACCAGAGACGAGCTTCTCCTTAGGCTGA
AGTGCTAGCCATACGACAGTGTCTGCTCCTTCTTCGCTTGTTCTAAGCTTACCAGAGAACGATTCTTTGAAACTGGGCAAACTCCT
GGCGACACCAGGTGTCTCAGCCCAGCCAGGGTGCATTGAGTAGAAACCTATGCCTTTGTTCTTGTACTTATCAGCCCATTTTTCTG
TCAGAGCCACCTGGATTCTTTTATTCCGTGCGTATTGTAACACTCCATCGAACTTTTCACCACTAAACTGAAGATCTGTTGTAAGT
GGCGACGTGTACATTCCACCAGAGGAGACGGTGATGACTTTGGAGTCAGGTGAGGCTTTCTCCAACAGTGGAAGCATCAGCTCTGT
CATCGTGTATGTCCCAAGTACATTTATTGCGAAGTTAAGCTCGAATCCTTCGGGTGTAGTAGTCCGTTTGTTCTCGAGCAAACCGG
CGTTATTAACCAGGACATGAACAGGAACATCCTTGGAAGCAAAAGTCGAAGCAAATGACTTTATATCATTAACAGAAGACAAATCA
CAAACTTCAAGGTAGACATTCTGGTTTCCTGTAGAGTTTTGAATCTTAGAAAGAGCCTCTTCTCCTCTTTCCTTGTTCCGACACAC
CATGTAAACATTTGCTCCACGTGAAGCAAGACCTTCAGCAGCGGCGTAACCAATACCAGAGTTAGCTCCAGTGACCACACAATTCT
TTCCTTGTATTTGTATCTGCATATCTTCAGGTTTGAACTTCTTTGAATGGTCTAGGAAACCATTCTTGGTGAAATTCATATAGCCA
TAAATCCCGAAAGCGGTTGATCTCCATGTCTTTAAGAGGAACATTTTGGTTTAGTTACGGAAGATGATAAGATGATGCGAGTTCCT
GAGTTGGTGGAGTGCGAGAGAGGTGTTAGATTAGTAGTAACGGTTCCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192713 Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | 1569 | 4e-172 |
| XP_002872460 short-chain dehydrogenase/reductase family protein [Arabidopsis lyrata subsp. lyrata] | 1562 | 3e-171 |
| ACU18254 unknown [Glycine max] | 1356 | 2e-147 |
| XP_002524356 short-chain dehydrogenase, putative [Ricinus communis] | 1352 | 6e-147 |
| XP_002265826 PREDICTED: hypothetical protein [Vitis vinifera] | 1319 | 4e-143 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| A6QP05 Dehydrogenase/reductase SDR family member 12 | 651 | 5e-067 |
| A0PJE2 Dehydrogenase/reductase SDR family member 12 | 637 | 2e-065 |
| Q8TC12 Retinol dehydrogenase 11 | 394 | 3e-037 |
| Q9QYF1 Retinol dehydrogenase 11 | 382 | 7e-036 |
| P59837 Retinol dehydrogenase 12 | 363 | 1e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SZ91 Putative uncharacterized protein AT4g09750 | 1569 | 3e-172 |
| C6T8V2 Putative uncharacterized protein | 1356 | 1e-147 |
| B9SED7 Short-chain dehydrogenase, putative | 1352 | 4e-147 |
| B9H7X1 Predicted protein | 1317 | 5e-143 |
| A5BUY7 Putative uncharacterized protein | 1315 | 8e-143 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G09750.1 short-chain dehydrogenase/reductase (SDR) family protein | 1569 | 2e-174 |
| AT4G11410.1 short-chain dehydrogenase/reductase (SDR) family protein | 280 | 4e-025 |
| AT4G23430.1 short-chain dehydrogenase/reductase (SDR) family protein | 257 | 2e-022 |
| AT4G23420.1 short-chain dehydrogenase/reductase (SDR) family protein | 255 | 4e-022 |
| AT4G23420.2 short-chain dehydrogenase/reductase (SDR) family protein | 255 | 4e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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