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Information for unigene UN20010

FASTA Sequence
Unigene ID: UN20010Length: 1152  SNP
GATCCTAAGTCCACTAGGATTATAATTAACCGTCAGTGTCAAACTCTAATCCTTAGGTTTACATTAGTTATGAGGACTGACCCGAT
GCTGAACTAATCATAAAGATTGACATAATACACGTTGCCAAAAAAAAGAGATATCTGAACTTTTTATACATATGATGATGATTATA
CAAAGTTGATATACAAGAGGAAAGTGATCGTATATGCTTTGTTCATATTCAAGAGGTCGTTGAAGATGCAGAGACGTTAGAAATCA
GTCTTACTTCATAGAGATCGTCACTTTCTCCTTTACCGACTTCTGCAGTGATGTTTGGTCCAAAGAAGGAAGTGAATTTCGCCTGT
CTTTTTTCGAAATCTGACAACTCGAGAGCTTTGGCCTCAAATACAAGGACGAGGCAGTAACGACCATCGGTCATGACCTCTTCCTT
TATCATCGTTAAGATAGGTGCACTACGTCTTGGTATTCCTCCGCCCAATCCATACTGAAAGATCCGTTTTAGTGCTTCTTCCAAAT
GTTGTTCATCTCCATAACGGTATCTCGTCACATCATTTCTAACCTGGGTTAAAATAGGAGTAGCAGAGCTCTCCCTAAGCTTCACC
GCATCTGCATAACTCAAGCAAGGAACTGGCTTGAGTTCTGCGTACTTGAGAGCCATACCGATAATAGCAAGTGGGAATCCATAAGT
GAGCATAATAGCAGACCACTCAGATCCAGGAAGGATGTTAAAGTACGCCCCGAAACCGTAAGAGAGGAGCGAGACACCGAGACCTA
GCCCAATAACACCAAATGAAATCTTGGCTAGAGTGAATTCATCGTCAGGGATCAAAGTTTTATCAGCGGAAGACACCACGGAAGGA
GAGGAGCTCGTGGAGTCAGCAGCTCTTGCCACGAAACCGAGCCTCCGAGTCTCTCGTTTCAGCTTCGTCTCCGGGACGTAGAGGAG
CCATCTCTTCTGTGAAGACGAAACGCCGACGGGTAGATTCTCATGGCGACGGTCGTAGAGACCTCCTGATCGCTGGTTGTTTTGGC
GACGGAGATGGAACGGTAAGACAGTGGCTGCCGATAAGGATCCCATTTCTCCTCCTCTTCTCTCTGTACCTGTGGGAAGAGAGTGA
GTAATATGAGGCTGAGGCAAAATCATAGCCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002868760 hypothetical protein ARALYDRAFT_494103 [Arabidopsis lyrata subsp. lyrata]11492e-123
NP_198682 protein acclimation of photosynthesis to environment [Arabidopsis thaliana]11071e-118
AAN71998 Unknown protein [Arabidopsis thaliana]11034e-118
BAC42585 unknown protein [Arabidopsis thaliana]11017e-118
NP_001190435 protein acclimation of photosynthesis to environment [Arabidopsis thaliana]10202e-108

Swiss-Prot top hits (Blast detail)Scoree value
Q55403 Thylakoid membrane protein slr05752715e-023

TrEMBL top hits (Blast detail)Scoree value
Q2HIR7 At5g3866011079e-119
Q8H0W8 Putative uncharacterized protein At5g3866011033e-118
Q8GXZ8 Putative uncharacterized protein At5g38660/MBB18_2111014e-118
B9SWM3 Putative uncharacterized protein9161e-096
B9H3P8 Predicted protein (Fragment)9098e-096

Arabidopsis top hits (Blast detail)Scoree value
AT5G38660.1 APE1 (ACCLIMATION OF PHOTOSYNTHESIS TO ENVIRONMENT)11121e-121

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  35%
 
114  24%
 
94  24%
 
122  12%
 
181  6%

Unigene MembersMember information