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Information for unigene UN20012
| FASTA Sequence |
| Unigene ID: UN20012 | Length: 1014 |
| SNP | ATAGTTTTGGGCTTTGATAAATATCATTAATAAAATCATACATTTAATGATAAATCTATCATAATATGAGAAAAGGAAACAGAGAG
AGCTAGGGTGAGATGCTGTAAATTACAATCAACTCATCTCCTAGTCTCTTGTGTATATCCATACATCTCTATTGCTTTGGGTGAGA
GTATTCCTAAGGATCTGAATACGTGATCAAGTGTGTTTGTGTTCTAGAGTAACAATAAGCTATAACCATTTGACTGATGCCTCCTC
CAAATGTCTCCCACTCACTCATCATCACCTCCTTCCTCCGCGTTGTCCTGCTCTTCGACCTGGGTTTCTTGAAAACTGGATCTGCA
AATTTTTGGAGTCCGGTTCATTTTCATCCATTCTATAGCCTTGCAGGGCGGTACGAGCAGTTGCTGCACATGCAGGGCTTTCAAAA
TCAACAAAACATAGAACAACAGGATCTCCATTCCTTTGCTTTGTATCTTTGGTCACAAGTCTCGCTTCTTTATATCCCAAAAACGG
TCGAAATATATGAGATACTTCCCTCCTGGAGCAATTAGAAGGAAGTCCTTCAACAAAAAGAGTGTTGGATGCATCTGGAGGCAGAC
GAAGCAGTTCCCGTCCAGGTCTACCAACTAAATCTTGTTGACCAAACCCCAAATCTCGACCATTTGGAGGCCCAAAATCTGGATGC
TGAACTCCACCACGCCCAGACATAAGCTCACCCATGTCACCTCCTCTGCCGACACCATGATACCGACCAGCTTCTTCAGATGGCCT
AGAAGACGTTTGCGCACTCTGAAGGTAGCGATCATAAGCTGAGCCAATAGTTCTCGTATCTCTTACTGAATGAAGGATACCTCTAT
CCTCATCCCGTGACACGTAATCATGTTCGAAGTCAGAACGGTGACGTTTCAGAGGACCTCCGTGGGGGATCGACGACATCGGAGGC
TGGTTCCAGTACCCATCTCCCATTGACGACGACTGAAACAATACTTTCTAATTTTCGCCCGATTTCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_177820 RNA recognition motif-containing protein [Arabidopsis thaliana] | 664 | 3e-067 |
| XP_002889109 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata] | 638 | 3e-064 |
| ACU23298 unknown [Glycine max] | 582 | 8e-058 |
| NP_173554 nucleic acid/nucleotide binding protein [Arabidopsis thaliana] | 572 | 1e-056 |
| NP_001154354 nucleic acid/nucleotide binding protein [Arabidopsis thaliana] | 572 | 1e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9W6I1 RNA-binding protein with multiple splicing | 130 | 9e-007 |
| Q9WVB0 RNA-binding protein with multiple splicing | 127 | 2e-006 |
| Q9YGP5 RNA-binding protein with multiple splicing | 127 | 2e-006 |
| Q93062 RNA-binding protein with multiple splicing | 125 | 4e-006 |
| Q8VC52 RNA-binding protein with multiple splicing 2 | 125 | 4e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A1A6K6 At1g76940 | 664 | 2e-067 |
| C6TK58 Putative uncharacterized protein | 582 | 6e-058 |
| B9RQ14 Nucleic acid binding protein, putative | 505 | 5e-049 |
| Q8GYL1 Putative uncharacterized protein At1g76940/F22K20_23 | 498 | 3e-048 |
| C6TF78 Putative uncharacterized protein | 467 | 1e-044 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G76940.1 RNA recognition motif (RRM)-containing protein | 664 | 1e-069 |
| AT1G21320.1 nucleic acid binding / nucleotide binding | 573 | 4e-059 |
| AT1G21320.2 nucleic acid binding / nucleotide binding | 573 | 4e-059 |
| AT3G13700.2 RNA-binding protein, putative | 123 | 5e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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