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Information for unigene UN20022
| FASTA Sequence |
| Unigene ID: UN20022 | Length: 810 |
SSR | SNP | GAGAGAAAACACCGGAACCAAATTGAAATTAAACTTTTAGTCATAATAAAAAGATGTCTTTAACATTGACAAGAACTCATTACCAG
AGAGGGCAGTTACACGCAATTTGAACATACAAAGTCACCGAGTAATCAAAATACACAGAAAAGGAAGGGGAGATCTATGTACTGAA
ACCGTGGTTCAAGAAGGTACATCTCCACCAGGCATCTCCCAGTCCCAGTTATCTTCTTGTTCATCCTTCTTCTTACCCTTGGTTGC
TGCCGCTGCTGTTTCTTCTCTGGTCTCTTGAGTAAACTTTGCAAACGGACGCCTTTTCTTGTTACGCTTAGCAGCATCACGAGTCC
TCCGCTTCTTCTCATCCTGCTTGTTCTCAAAGTACCTCCTCCTCTTGCATTCCTGTATGACTCCGGTTCTCATCACCTCCCTTCTA
AACCGATTCACCAGCCTCTCCTCCGACTCGTTGTCCTCCACGAACACCTGCACGTTGTACCCCGAGCTGCTGAAGAGGAGCGTGTT
CGAGTAAGCGAGCGACGGGCATATCACCGAAGCGAGCTCCGAGGAGGAGAGAGAAGCGTTGTAAGGAGGAAGCTCGTCCGCGTCCA
CGGCCTTTGATTCGATGGCGACATCGTTTCTACGTCTGTGGGAGACTGTTGTTGGAGTGGGGAGAGTGAGGTTGGGAGGCGGGGTT
GGTTTGGTGTGGGATTTGAATGGGGAGATGAAGGAGATGAAGCTCGTGAGTGAGAACGAAGCCGCCATTTACGCCTCTGTGATGAT
GATGATGATGAAGAAGCAGAAGAAGAAAGAGATTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875359 hypothetical protein ARALYDRAFT_484499 [Arabidopsis lyrata subsp. lyrata] | 777 | 1e-080 |
| NP_566809 ribosomal protein S21 family protein [Arabidopsis thaliana] | 759 | 2e-078 |
| AAK64005 AT3g27160/MYF5_3 [Arabidopsis thaliana] | 755 | 5e-078 |
| XP_002268728 PREDICTED: hypothetical protein [Vitis vinifera] | 463 | 4e-044 |
| CAN82190 hypothetical protein VITISV_031115 [Vitis vinifera] | 454 | 4e-043 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P82024 30S ribosomal protein S21, chloroplastic (Fragment) | 139 | 6e-008 |
| B2UNE2 30S ribosomal protein S21 | 131 | 5e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LI88 Genomic DNA, chromosome 3, P1 clone:MYF5 | 759 | 1e-078 |
| Q94BT7 AT3g27160/MYF5_3 | 755 | 3e-078 |
| A5AI30 Putative uncharacterized protein | 454 | 3e-043 |
| Q8VWX5 Ribosome-like protein (Fragment) | 418 | 4e-039 |
| B9RBJ4 Structural constituent of ribosome, putative | 393 | 3e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G27160.1 GHS1 (GLUCOSE HYPERSENSITIVE 1); structural constituent of ribosome | 775 | 1e-082 |
| AT5G63300.1 structural constituent of ribosome | 257 | 1e-022 |
| AT5G63300.2 structural constituent of ribosome | 215 | 8e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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