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Information for unigene UN20027

FASTA Sequence
Unigene ID: UN20027Length: 959 SSRSNP
AAATTCTCCGACTCCAACCAGAGGAGCCAGACCACAACAAGCCCGCCGAAGGAACCGAAACAACCAACAGACCAGCTTCATCCTCC
GAGCTCATGGCTAGTGCCAAGGTCGTAGCCGAAGCTGCTCAAGCCGCTGCTCGTAACGAGTCAGACAAACTCGACAAGGCTAAAGT
CGCTGGAGCCAGCGCTGATATCTTAGATGCCGCCCAGAAATACGGAAAGCTCGATGAGAAGAGCGGCACTGGTCAGTACCTGGAGA
AGGCCGAGAAGTATCTAAACGACTTCGAGTCCTCACATTCCTCCGGCGCCGCCGGTACTCCCACAAATCAACTCGAAAAAGATCGA
AGAAGAGAGACTCAGAAATGGCTTCTACCTCCGCTGTAGCATCGGTCATGCCACTCACCCAAAACCGATCATCTTCGGCGAAAACC
ATTGCTTTTCTCAAGCCACTGCCTTTGAAACCATCTAAGGCGTCCTCCTTCTCCGTAGCCATGCCTTCACGGAAGTTTCAAGTGAA
TGCGTCTAACCTGAAGATGGAGAAGGCTGTGAGCGGCTTAGCAGCGGCAGCTCTCACCGTTTCCATGGTGATCCCTGAGGTGGCTG
AAGCGGCAGGTTCAGGTATCTCTCCTTCTCTCAAGAACTTTTTGCTTAGCATTGCCGCAGGAGGCGTGGTGCTCACGGTCATCATC
GGTGTTGTTGTTGGTGTCTCCAACTTTGATCCTGTCAAGAGAGGCTAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAAAGAGAAATGATCTCTGTTATTACTCTTTGTTGTCTGTTATCGATTTGTGAATGCATGTAATGAACTTTTGGCATT
CTTCTTCAATCTTATATGCTTCTTATATTAAGCTATCATGACCAGATTTGGCCTTCATATTAAGTATTCATCTTTGATGTCAAGAT
TTATTTATATGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_563934 uncharacterized protein [Arabidopsis thaliana]4483e-042
AAM62639 unknown [Arabidopsis thaliana]4402e-041
XP_002890030 hypothetical protein ARALYDRAFT_471553 [Arabidopsis lyrata subsp. lyrata]4242e-039
ACF23022 ST6-66 [Eutrema halophilum]3892e-035
XP_002876886 hypothetical protein ARALYDRAFT_904624 [Arabidopsis lyrata subsp. lyrata]3552e-031

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9XI93 At1g13930/F16A14.274482e-042
Q8LEH5 Putative uncharacterized protein4401e-041
B4YYA5 ST6-663891e-035
Q9ZQ80 Putative uncharacterized protein At2g034403541e-031
Q84VZ7 At2g034403532e-031

Arabidopsis top hits (Blast detail)Scoree value
AT1G13930.1 Involved in response to salt stress. Knockout mutants are hypersensitive to salt stress.4481e-044
AT2G03440.1 nodulin-related3548e-034
AT2G06520.1 PSBX (photosystem II subunit X)3459e-033

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
1911  50%
 
125  23%
 
103  14%
 
62  9%
 
181  5%

Unigene MembersMember information