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Information for unigene UN20037

FASTA Sequence
Unigene ID: UN20037Length: 951  SNP
GGGCGAGTTGAGACGCGCAACTGTATTTTACTCAATGCTCATGCAACTATACTAGTGATCTACAAATTGCCGCGTGCATATACAAT
ATATAGTACAAGTTTTATATATCCTGCCAAATCCTCGGTTCCAAATCATTTTATGTTATATATAATTATACATTTACAATTTTTTT
GTTTCTGTCTTTATTCTCACAATTAGATTACAAAACGGGGAATAACCAAAACAGAGGGCAGCTTATAAGAGAACTGGATATCCCTC
TTGGAAGGAGAGAAAAGAGATGGTGAGGTTGAGAGAAACAGAAGTGATCCTGAGACTCTGTATCGTCTTTCTTCTTATACTCACTT
CTATTCTGATTGGTTTGGATTCTCAGACCAAAGATATTGCTTATATCCACAAGAAAGTCACTTTCAGATACTTGTTTGCTCTGGAG
GTTGAGTTGTACATAAATGCTGTGGTTGCTGCATATAATATCGTTCAGTTAGGATTTGGTTGGTACGGTGTTGCACAAAAAAACTC
CAATTCTAAATGGCTCTCTTACCTCTTGGATCAGACGGCGGTGTACGTGGTGTTCGCCGGGGCATCTGCGGCGGCACAACACTCAT
TGCTTGTGGTGACTGGTTCGAAGGAGCTTCAGTGGATGAAGTGGTGCTACAAGTTCACAAGGTTCTGCTTTCAGATCGGAAGTGCC
ATTATCTTAAACTACATCGCAGCGGTGCTCATGATCATCCTCTCCTTCATCTCCTCCTTCAGTCTCTTCCGCCTCTATTCCCCTAA
ACGTTATTTTCAGTTTAAGTCCTCCTCTTAATTATTTACTAGGTTAAATCCTTTTCTTGATCTAAAATAATGTTGATTAATGCGAA
GAATATGATTATTGTTCGTCTCTAAATTATAATTCTGTATCTTTAAGTAAATGCAAAATTTTCTTACATAAATATCGTTAGTCCAT
TGCCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869651 predicted protein [Arabidopsis lyrata subsp. lyrata]7646e-079
NP_567729 uncharacterized protein [Arabidopsis thaliana]7602e-078
CAB39604 putative mitochondrial protein [Arabidopsis thaliana]7233e-074
B9IM09 RecName: Full=CASP-like protein POPTRDRAFT_5786144303e-040
Q5K4H9 RecName: Full=CASP-like protein XL34161e-038

Swiss-Prot top hits (Blast detail)Scoree value
Q8L8U9 UPF0497 membrane protein At4g258307607e-080
Q5K4H9 UPF0497 membrane protein xl34166e-040
A7Q6G6 UPF0497 membrane protein 134041e-038
C6SZ04 UPF0497 membrane protein 83271e-029
B8LQF9 UPF0497 membrane protein 52671e-022

TrEMBL top hits (Blast detail)Scoree value
B9T767 Putative uncharacterized protein2932e-024
B9IM09 Predicted protein2904e-024
B9HD38 Predicted protein2591e-020
A5C3N9 Putative uncharacterized protein2502e-019
B8B0Y5 Putative uncharacterized protein2448e-019

Arabidopsis top hits (Blast detail)Scoree value
AT4G25830.1 integral membrane family protein7615e-081
AT2G35760.1 integral membrane family protein2598e-023
AT4G16442.1 integral membrane family protein2023e-016
AT2G36100.1 integral membrane family protein1262e-007
AT3G14380.1 integral membrane family protein1235e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  15%
 
114  31%
 
73  23%
 
82  15%
 
62  15%

Unigene MembersMember information