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Information for unigene UN20038
| FASTA Sequence |
| Unigene ID: UN20038 | Length: 1679 |
SSR | | GGAAAACAGGTAGTCGGCCCAATACCAAAAATCCCAACCCACCGGCTTGTCCAAAAAAACCTTCTCTACTACTTTTACCCTACTTG
TCCGATCGAATTCTACTCAGCTTCGCCTTCGATTTTTGTCCGTGAGTAGCTTAATCTTCCAATCGGTGTTGGTTTCTTCTTCTTCT
GGTCGTCATGGCTTCAGATGCTGATATGGAGGACTATGGATTCGAGTATTCCGATGACGAACAGGAGGAACAAGACGTTGACATTG
AGAATCAGTATTACAGCGCCAAAGGTATGGTTGAGACCGAGCCTGAAGCTGCACTTTCTGAGTTTGCTGAGGTTGTTAAGATGGAA
CCAGACAAGGCCGAGTGGGGTTTCAAAGCGCTTAAGCAGACGGTGAAGATTTACTATCGACTTGGTAAATACAAAGAGATGATGGA
TGCATACAGAGAGATGCTTACCTATATCAAGTCGGCAGTGACCAGGAACTACAGCGAGAAATGTATAAACAATATCATGGACTTCG
TCTCTGGATCTGCTAGCCAGAACACTGGCCTGCTTCAAGAGTTTTACCAGACCACCTTGAAAGCCCTTGAAGAGGCTAAGAACGAG
AGACTCTGGTTCAAGACGAATCTTAAGCTCTGCAACATCTGGTTTGACATTGGTGAATACAGACGAATGACTAAGATCCTGAAGGA
ACTGCATAAATCTTGTCAAAAGGAAGATGGAACTGATGATCAAAAGAAAGGAAGTCAGCTGCTTGAGGTTTATGCGATTGAAATTC
AGATCTACACTGAAACAAAGGACAACAAAAAGCTTAAGCAACTATACCAGAAAGCACTTGCTATCAAATCTGCTATACCTCATCCT
AGGATCATGGGCATAATCCGCGAGTGTGGTGGCAAAATGCACATGGCAGAACGTCAGTGGGCAGAAGCGGCTACAGACTTCTTTGA
GGCTTTCAAAAATTATGATGAAGCTGGCAACCAAAGGCGTATTCAGTGCTTAAAGTATCTTGTTCTTGCAAATATGCTGATGGAAT
CAGAAGTGAACCCATTTGACGGTCAAGAGGCAAAGCCGTACAAAAACGACCCTGAGATCTTGGCAATGACGAATCTGATAGCAGCA
TATCAACGAAACGAAATTATAGAGTTTGAGAAAATACTTAAGAATAACCGGAGGACGATAATGGATGATCCATTCATCAGAAACTA
CATGGAAGATCTGCTGAAGAAGGTGAGAACTCAGGTGTTGCTGAAGCTGATAAAGCCGTACACGAAGATCAAGATTCCCTTTATAT
CAAAGGAGCTGAACGTGCCGGAGAAGGATGTGACGGAGTTGCTGGTGTCGCTGATTCTTGACAGCCGAATCGATGGGCACATTGAT
GAAATCAACCGTTACTTGCTGAGAGGTGACAGTGCTAATGGAAGGAAGCTTCACAAGGCGGTTGATAAATGGAACACACAACTCAA
GTCTTTGTCTATGAGTATCACCAACCGAGTTTGTTAATTTCCCTCCACCTCTCTCTCTCTCTCTCTCTTGGATAATTGTCACGGTT
TAACTTTTTTTCTGGTTTGGTGGATTATTGTTTGATCCAAAAACGGTCGATTTGCTGGAAGTGTTTGTTGGAATCAGACAATGAAT
TTGTATGGAGATTTATGAGAAATCATCATAAAAATGAGTTAAATG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33758 unnamed protein product [Thellungiella halophila] | 2210 | 3e-246 |
| XP_002880866 hypothetical protein ARALYDRAFT_481579 [Arabidopsis lyrata subsp. lyrata] | 2190 | 6e-244 |
| NP_565632 COP9 signalosome complex subunit 2 [Arabidopsis thaliana] | 2174 | 4e-242 |
| AAK91453 At2g26990/T20P8.4 [Arabidopsis thaliana] | 2169 | 2e-241 |
| XP_002532580 cop9 signalosome complex subunit, putative [Ricinus communis] | 2070 | 5e-230 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W207 COP9 signalosome complex subunit 2 | 2174 | 2e-243 |
| Q6IR75 COP9 signalosome complex subunit 2 (Fragment) | 1434 | 1e-157 |
| P61201 COP9 signalosome complex subunit 2 | 1424 | 2e-156 |
| P61202 COP9 signalosome complex subunit 2 | 1424 | 2e-156 |
| P61203 COP9 signalosome complex subunit 2 | 1424 | 2e-156 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T2W1 Cop9 signalosome complex subunit, putative | 2070 | 3e-230 |
| A9P7W9 Predicted protein | 2048 | 1e-227 |
| B9N6U1 Predicted protein | 2042 | 6e-227 |
| B8ACJ7 Putative uncharacterized protein | 1995 | 2e-221 |
| Q0JNL8 Os01g0279200 protein | 1995 | 2e-221 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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